Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
DDX47Q9H0S4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DDX47Q9H0S4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
DDX47Q9H0S4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
DDX47Q9H0S4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
DDX47Q9H0S4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.93■■□□□ 1.74
DDX47Q9H0S4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
DDX47Q9H0S4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
DDX47Q9H0S4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.92■■□□□ 1.74
DDX47Q9H0S4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX47Q9H0S4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX47Q9H0S4 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.9■■□□□ 1.74
DDX47Q9H0S4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
DDX47Q9H0S4 SUZ12P1-203ENST00000578195 985 ntBASIC25.9■■□□□ 1.74
DDX47Q9H0S4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
DDX47Q9H0S4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
DDX47Q9H0S4 AC092803.2-201ENST00000564287 1899 ntBASIC25.89■■□□□ 1.74
DDX47Q9H0S4 AP004609.3-201ENST00000610705 1884 ntBASIC25.89■■□□□ 1.74
DDX47Q9H0S4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.89■■□□□ 1.74
DDX47Q9H0S4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
DDX47Q9H0S4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
DDX47Q9H0S4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
DDX47Q9H0S4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.73
DDX47Q9H0S4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
DDX47Q9H0S4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
DDX47Q9H0S4 DUSP8P4-201ENST00000399538 1761 ntBASIC25.87■■□□□ 1.73
DDX47Q9H0S4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.87■■□□□ 1.73
DDX47Q9H0S4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX47Q9H0S4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX47Q9H0S4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.86■■□□□ 1.73
DDX47Q9H0S4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
DDX47Q9H0S4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
DDX47Q9H0S4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
DDX47Q9H0S4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.86■■□□□ 1.73
DDX47Q9H0S4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX47Q9H0S4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX47Q9H0S4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX47Q9H0S4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX47Q9H0S4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
DDX47Q9H0S4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
DDX47Q9H0S4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.84■■□□□ 1.73
DDX47Q9H0S4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.84■■□□□ 1.73
DDX47Q9H0S4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
DDX47Q9H0S4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
DDX47Q9H0S4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
DDX47Q9H0S4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
DDX47Q9H0S4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
DDX47Q9H0S4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
DDX47Q9H0S4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
DDX47Q9H0S4 DUX4L28-201ENST00000623687 678 ntBASIC25.82■■□□□ 1.72
DDX47Q9H0S4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
DDX47Q9H0S4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
DDX47Q9H0S4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
DDX47Q9H0S4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
DDX47Q9H0S4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.81■■□□□ 1.72
DDX47Q9H0S4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
DDX47Q9H0S4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX47Q9H0S4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
DDX47Q9H0S4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX47Q9H0S4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.8■■□□□ 1.72
DDX47Q9H0S4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX47Q9H0S4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.79■■□□□ 1.72
DDX47Q9H0S4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX47Q9H0S4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
DDX47Q9H0S4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
DDX47Q9H0S4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX47Q9H0S4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX47Q9H0S4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX47Q9H0S4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX47Q9H0S4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX47Q9H0S4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.77■■□□□ 1.72
DDX47Q9H0S4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.77■■□□□ 1.72
DDX47Q9H0S4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.77■■□□□ 1.72
DDX47Q9H0S4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
DDX47Q9H0S4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
DDX47Q9H0S4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
DDX47Q9H0S4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.76■■□□□ 1.71
DDX47Q9H0S4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.76■■□□□ 1.71
DDX47Q9H0S4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.75■■□□□ 1.71
DDX47Q9H0S4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.75■■□□□ 1.71
DDX47Q9H0S4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.74■■□□□ 1.71
DDX47Q9H0S4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.74■■□□□ 1.71
DDX47Q9H0S4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
DDX47Q9H0S4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
DDX47Q9H0S4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
DDX47Q9H0S4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
DDX47Q9H0S4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
DDX47Q9H0S4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
DDX47Q9H0S4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.73■■□□□ 1.71
DDX47Q9H0S4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
DDX47Q9H0S4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
DDX47Q9H0S4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
DDX47Q9H0S4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.73■■□□□ 1.71
DDX47Q9H0S4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
DDX47Q9H0S4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX47Q9H0S4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.72■■□□□ 1.71
DDX47Q9H0S4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX47Q9H0S4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
DDX47Q9H0S4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
DDX47Q9H0S4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms