Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COMMD4Q9H0A8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.87■■□□□ 1.09
COMMD4Q9H0A8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COMMD4Q9H0A8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
COMMD4Q9H0A8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COMMD4Q9H0A8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COMMD4Q9H0A8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COMMD4Q9H0A8 MIR6090-201ENST00000622481 60 ntBASIC21.86■■□□□ 1.09
COMMD4Q9H0A8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
COMMD4Q9H0A8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COMMD4Q9H0A8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.86■■□□□ 1.09
COMMD4Q9H0A8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
COMMD4Q9H0A8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COMMD4Q9H0A8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COMMD4Q9H0A8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
COMMD4Q9H0A8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.85■■□□□ 1.09
COMMD4Q9H0A8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COMMD4Q9H0A8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
COMMD4Q9H0A8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COMMD4Q9H0A8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COMMD4Q9H0A8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COMMD4Q9H0A8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COMMD4Q9H0A8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.83■■□□□ 1.08
COMMD4Q9H0A8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COMMD4Q9H0A8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.82■■□□□ 1.08
COMMD4Q9H0A8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.82■■□□□ 1.08
COMMD4Q9H0A8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.82■■□□□ 1.08
COMMD4Q9H0A8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COMMD4Q9H0A8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COMMD4Q9H0A8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.82■■□□□ 1.08
COMMD4Q9H0A8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COMMD4Q9H0A8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COMMD4Q9H0A8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COMMD4Q9H0A8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COMMD4Q9H0A8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COMMD4Q9H0A8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
COMMD4Q9H0A8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COMMD4Q9H0A8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.81■■□□□ 1.08
COMMD4Q9H0A8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.8■■□□□ 1.08
COMMD4Q9H0A8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COMMD4Q9H0A8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.8■■□□□ 1.08
COMMD4Q9H0A8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.8■■□□□ 1.08
COMMD4Q9H0A8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.8■■□□□ 1.08
COMMD4Q9H0A8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COMMD4Q9H0A8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.8■■□□□ 1.08
COMMD4Q9H0A8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
COMMD4Q9H0A8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
COMMD4Q9H0A8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
COMMD4Q9H0A8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COMMD4Q9H0A8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COMMD4Q9H0A8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.79■■□□□ 1.08
COMMD4Q9H0A8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COMMD4Q9H0A8 AP004609.3-201ENST00000610705 1884 ntBASIC21.79■■□□□ 1.08
COMMD4Q9H0A8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COMMD4Q9H0A8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COMMD4Q9H0A8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COMMD4Q9H0A8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.78■■□□□ 1.08
COMMD4Q9H0A8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.77■■□□□ 1.08
COMMD4Q9H0A8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.77■■□□□ 1.08
COMMD4Q9H0A8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.77■■□□□ 1.07
COMMD4Q9H0A8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
COMMD4Q9H0A8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.77■■□□□ 1.07
COMMD4Q9H0A8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COMMD4Q9H0A8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COMMD4Q9H0A8 AC092803.2-201ENST00000564287 1899 ntBASIC21.76■■□□□ 1.07
COMMD4Q9H0A8 DUX4L28-201ENST00000623687 678 ntBASIC21.76■■□□□ 1.07
COMMD4Q9H0A8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
COMMD4Q9H0A8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
COMMD4Q9H0A8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.75■■□□□ 1.07
COMMD4Q9H0A8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COMMD4Q9H0A8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.75■■□□□ 1.07
COMMD4Q9H0A8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COMMD4Q9H0A8 MIR3665-201ENST00000578708 105 ntBASIC21.74■■□□□ 1.07
COMMD4Q9H0A8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COMMD4Q9H0A8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COMMD4Q9H0A8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COMMD4Q9H0A8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COMMD4Q9H0A8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.73■■□□□ 1.07
COMMD4Q9H0A8 DUSP8P4-201ENST00000399538 1761 ntBASIC21.73■■□□□ 1.07
COMMD4Q9H0A8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COMMD4Q9H0A8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.72■■□□□ 1.07
COMMD4Q9H0A8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COMMD4Q9H0A8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.72■■□□□ 1.07
COMMD4Q9H0A8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
COMMD4Q9H0A8 AC020928.2-201ENST00000588717 2197 ntBASIC21.71■■□□□ 1.07
COMMD4Q9H0A8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COMMD4Q9H0A8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.71■■□□□ 1.07
COMMD4Q9H0A8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.71■■□□□ 1.07
COMMD4Q9H0A8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
COMMD4Q9H0A8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COMMD4Q9H0A8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COMMD4Q9H0A8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.7■■□□□ 1.06
COMMD4Q9H0A8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COMMD4Q9H0A8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COMMD4Q9H0A8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
COMMD4Q9H0A8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
COMMD4Q9H0A8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.69■■□□□ 1.06
COMMD4Q9H0A8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COMMD4Q9H0A8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.68■■□□□ 1.06
COMMD4Q9H0A8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms