Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CHD6Q8TD26 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CHD6Q8TD26 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.42■■□□□ 1.34
CHD6Q8TD26 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CHD6Q8TD26 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.42■■□□□ 1.34
CHD6Q8TD26 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
CHD6Q8TD26 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.42■■□□□ 1.34
CHD6Q8TD26 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CHD6Q8TD26 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.41■■□□□ 1.34
CHD6Q8TD26 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CHD6Q8TD26 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.41■■□□□ 1.34
CHD6Q8TD26 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CHD6Q8TD26 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHD6Q8TD26 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.4■■□□□ 1.34
CHD6Q8TD26 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHD6Q8TD26 AC133561.4-201ENST00000566112 224 ntBASIC23.4■■□□□ 1.34
CHD6Q8TD26 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
CHD6Q8TD26 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CHD6Q8TD26 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.39■■□□□ 1.33
CHD6Q8TD26 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHD6Q8TD26 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD6Q8TD26 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD6Q8TD26 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.38■■□□□ 1.33
CHD6Q8TD26 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHD6Q8TD26 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHD6Q8TD26 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.37■■□□□ 1.33
CHD6Q8TD26 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.37■■□□□ 1.33
CHD6Q8TD26 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.37■■□□□ 1.33
CHD6Q8TD26 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.36■■□□□ 1.33
CHD6Q8TD26 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD6Q8TD26 ESRRAP2-201ENST00000418437 1549 ntBASIC23.36■■□□□ 1.33
CHD6Q8TD26 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD6Q8TD26 KRT125P-201ENST00000546827 989 ntBASIC23.36■■□□□ 1.33
CHD6Q8TD26 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD6Q8TD26 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.35■■□□□ 1.33
CHD6Q8TD26 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHD6Q8TD26 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.35■■□□□ 1.33
CHD6Q8TD26 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHD6Q8TD26 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.35■■□□□ 1.33
CHD6Q8TD26 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.35■■□□□ 1.33
CHD6Q8TD26 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.34■■□□□ 1.33
CHD6Q8TD26 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.34■■□□□ 1.33
CHD6Q8TD26 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CHD6Q8TD26 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD6Q8TD26 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.33■■□□□ 1.33
CHD6Q8TD26 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.33■■□□□ 1.33
CHD6Q8TD26 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.33■■□□□ 1.33
CHD6Q8TD26 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHD6Q8TD26 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
CHD6Q8TD26 LONRF2P2-201ENST00000439212 571 ntBASIC23.33■■□□□ 1.33
CHD6Q8TD26 UNC93B8-201ENST00000511903 705 ntBASIC23.33■■□□□ 1.33
CHD6Q8TD26 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.33■■□□□ 1.33
CHD6Q8TD26 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHD6Q8TD26 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHD6Q8TD26 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.32■■□□□ 1.32
CHD6Q8TD26 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.32■■□□□ 1.32
CHD6Q8TD26 MIR4787-201ENST00000607364 84 ntBASIC23.32■■□□□ 1.32
CHD6Q8TD26 AC126177.7-201ENST00000547904 679 ntBASIC23.32■■□□□ 1.32
CHD6Q8TD26 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHD6Q8TD26 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.32■■□□□ 1.32
CHD6Q8TD26 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
CHD6Q8TD26 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CHD6Q8TD26 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.31■■□□□ 1.32
CHD6Q8TD26 AC093536.1-201ENST00000569153 554 ntBASIC23.31■■□□□ 1.32
CHD6Q8TD26 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD6Q8TD26 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD6Q8TD26 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.3■■□□□ 1.32
CHD6Q8TD26 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.3■■□□□ 1.32
CHD6Q8TD26 AC090192.1-201ENST00000517740 490 ntBASIC23.3■■□□□ 1.32
CHD6Q8TD26 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD6Q8TD26 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.29■■□□□ 1.32
CHD6Q8TD26 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CHD6Q8TD26 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHD6Q8TD26 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD6Q8TD26 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD6Q8TD26 AC096631.2-201ENST00000436136 790 ntBASIC23.29■■□□□ 1.32
CHD6Q8TD26 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.28■■□□□ 1.32
CHD6Q8TD26 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.28■■□□□ 1.32
CHD6Q8TD26 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.28■■□□□ 1.32
CHD6Q8TD26 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.28■■□□□ 1.32
CHD6Q8TD26 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD6Q8TD26 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD6Q8TD26 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.27■■□□□ 1.32
CHD6Q8TD26 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.27■■□□□ 1.32
CHD6Q8TD26 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD6Q8TD26 AC110285.7-201ENST00000624417 1536 ntBASIC23.27■■□□□ 1.32
CHD6Q8TD26 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD6Q8TD26 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CHD6Q8TD26 KRT16P3-201ENST00000439127 1283 ntBASIC23.26■■□□□ 1.31
CHD6Q8TD26 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD6Q8TD26 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CHD6Q8TD26 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD6Q8TD26 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CHD6Q8TD26 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.24■■□□□ 1.31
CHD6Q8TD26 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHD6Q8TD26 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.24■■□□□ 1.31
CHD6Q8TD26 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHD6Q8TD26 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CHD6Q8TD26 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CHD6Q8TD26 AL136116.3-201ENST00000402907 1138 ntBASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms