Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
HIPK4Q8NE63 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
HIPK4Q8NE63 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
HIPK4Q8NE63 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.93■■□□□ 1.42
HIPK4Q8NE63 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
HIPK4Q8NE63 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.93■■□□□ 1.42
HIPK4Q8NE63 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
HIPK4Q8NE63 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
HIPK4Q8NE63 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
HIPK4Q8NE63 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.92■■□□□ 1.42
HIPK4Q8NE63 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.92■■□□□ 1.42
HIPK4Q8NE63 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
HIPK4Q8NE63 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
HIPK4Q8NE63 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
HIPK4Q8NE63 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
HIPK4Q8NE63 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
HIPK4Q8NE63 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
HIPK4Q8NE63 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
HIPK4Q8NE63 MIR762-201ENST00000390236 83 ntBASIC23.9■■□□□ 1.42
HIPK4Q8NE63 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
HIPK4Q8NE63 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
HIPK4Q8NE63 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
HIPK4Q8NE63 AP002414.2-202ENST00000590929 1450 ntBASIC23.89■■□□□ 1.42
HIPK4Q8NE63 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
HIPK4Q8NE63 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
HIPK4Q8NE63 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
HIPK4Q8NE63 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HIPK4Q8NE63 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HIPK4Q8NE63 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HIPK4Q8NE63 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
HIPK4Q8NE63 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.88■■□□□ 1.41
HIPK4Q8NE63 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.88■■□□□ 1.41
HIPK4Q8NE63 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HIPK4Q8NE63 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
HIPK4Q8NE63 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
HIPK4Q8NE63 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.87■■□□□ 1.41
HIPK4Q8NE63 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.87■■□□□ 1.41
HIPK4Q8NE63 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HIPK4Q8NE63 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
HIPK4Q8NE63 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
HIPK4Q8NE63 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HIPK4Q8NE63 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.86■■□□□ 1.41
HIPK4Q8NE63 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
HIPK4Q8NE63 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.86■■□□□ 1.41
HIPK4Q8NE63 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
HIPK4Q8NE63 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
HIPK4Q8NE63 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.85■■□□□ 1.41
HIPK4Q8NE63 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HIPK4Q8NE63 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
HIPK4Q8NE63 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
HIPK4Q8NE63 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.84■■□□□ 1.41
HIPK4Q8NE63 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.84■■□□□ 1.41
HIPK4Q8NE63 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.83■■□□□ 1.41
HIPK4Q8NE63 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
HIPK4Q8NE63 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.83■■□□□ 1.41
HIPK4Q8NE63 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
HIPK4Q8NE63 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.83■■□□□ 1.41
HIPK4Q8NE63 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HIPK4Q8NE63 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
HIPK4Q8NE63 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
HIPK4Q8NE63 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HIPK4Q8NE63 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
HIPK4Q8NE63 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HIPK4Q8NE63 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
HIPK4Q8NE63 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.82■■□□□ 1.4
HIPK4Q8NE63 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.82■■□□□ 1.4
HIPK4Q8NE63 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HIPK4Q8NE63 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
HIPK4Q8NE63 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HIPK4Q8NE63 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
HIPK4Q8NE63 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HIPK4Q8NE63 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.79■■□□□ 1.4
HIPK4Q8NE63 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HIPK4Q8NE63 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HIPK4Q8NE63 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.79■■□□□ 1.4
HIPK4Q8NE63 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HIPK4Q8NE63 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HIPK4Q8NE63 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
HIPK4Q8NE63 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HIPK4Q8NE63 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HIPK4Q8NE63 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
HIPK4Q8NE63 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HIPK4Q8NE63 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
HIPK4Q8NE63 AC092803.2-201ENST00000564287 1899 ntBASIC23.78■■□□□ 1.4
HIPK4Q8NE63 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
HIPK4Q8NE63 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HIPK4Q8NE63 DUSP8P4-201ENST00000399538 1761 ntBASIC23.78■■□□□ 1.4
HIPK4Q8NE63 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HIPK4Q8NE63 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.77■■□□□ 1.4
HIPK4Q8NE63 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
HIPK4Q8NE63 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HIPK4Q8NE63 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HIPK4Q8NE63 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.76■■□□□ 1.39
HIPK4Q8NE63 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HIPK4Q8NE63 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.75■■□□□ 1.39
HIPK4Q8NE63 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HIPK4Q8NE63 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HIPK4Q8NE63 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
HIPK4Q8NE63 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HIPK4Q8NE63 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms