Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC71LQ8N9Z2 DUSP8P4-201ENST00000399538 1761 ntBASIC20.61■□□□□ 0.89
CCDC71LQ8N9Z2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC71LQ8N9Z2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.61■□□□□ 0.89
CCDC71LQ8N9Z2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC71LQ8N9Z2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC71LQ8N9Z2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC71LQ8N9Z2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CCDC71LQ8N9Z2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC71LQ8N9Z2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CCDC71LQ8N9Z2 AC092803.2-201ENST00000564287 1899 ntBASIC20.6■□□□□ 0.89
CCDC71LQ8N9Z2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC71LQ8N9Z2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.59■□□□□ 0.89
CCDC71LQ8N9Z2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC71LQ8N9Z2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CCDC71LQ8N9Z2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC71LQ8N9Z2 CAHM-201ENST00000604200 896 ntBASIC20.59■□□□□ 0.89
CCDC71LQ8N9Z2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC71LQ8N9Z2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC71LQ8N9Z2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CCDC71LQ8N9Z2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC71LQ8N9Z2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC71LQ8N9Z2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC71LQ8N9Z2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
CCDC71LQ8N9Z2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC71LQ8N9Z2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC71LQ8N9Z2 WHAMMP2-203ENST00000563942 1603 ntBASIC20.56■□□□□ 0.88
CCDC71LQ8N9Z2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC71LQ8N9Z2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC71LQ8N9Z2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC71LQ8N9Z2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC71LQ8N9Z2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC71LQ8N9Z2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC71LQ8N9Z2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC71LQ8N9Z2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC71LQ8N9Z2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC71LQ8N9Z2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC71LQ8N9Z2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC71LQ8N9Z2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC71LQ8N9Z2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC71LQ8N9Z2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC71LQ8N9Z2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC71LQ8N9Z2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC71LQ8N9Z2 AP004609.3-201ENST00000610705 1884 ntBASIC20.54■□□□□ 0.88
CCDC71LQ8N9Z2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CCDC71LQ8N9Z2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CCDC71LQ8N9Z2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC71LQ8N9Z2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC71LQ8N9Z2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC71LQ8N9Z2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC71LQ8N9Z2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC71LQ8N9Z2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC71LQ8N9Z2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC71LQ8N9Z2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC71LQ8N9Z2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC71LQ8N9Z2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CCDC71LQ8N9Z2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC71LQ8N9Z2 MIR762-201ENST00000390236 83 ntBASIC20.52■□□□□ 0.88
CCDC71LQ8N9Z2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC71LQ8N9Z2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC71LQ8N9Z2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC71LQ8N9Z2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CCDC71LQ8N9Z2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC71LQ8N9Z2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC71LQ8N9Z2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC71LQ8N9Z2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC71LQ8N9Z2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC71LQ8N9Z2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC71LQ8N9Z2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CCDC71LQ8N9Z2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC71LQ8N9Z2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC71LQ8N9Z2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC71LQ8N9Z2 LINC00273-201ENST00000539813 1452 ntBASIC20.49■□□□□ 0.87
CCDC71LQ8N9Z2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC71LQ8N9Z2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC71LQ8N9Z2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC71LQ8N9Z2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CCDC71LQ8N9Z2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC71LQ8N9Z2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC71LQ8N9Z2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC71LQ8N9Z2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC71LQ8N9Z2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC71LQ8N9Z2 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.48■□□□□ 0.87
CCDC71LQ8N9Z2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC71LQ8N9Z2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC71LQ8N9Z2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CCDC71LQ8N9Z2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC71LQ8N9Z2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC71LQ8N9Z2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC71LQ8N9Z2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC71LQ8N9Z2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC71LQ8N9Z2 AC108673.1-201ENST00000510422 1159 ntBASIC20.47■□□□□ 0.87
CCDC71LQ8N9Z2 AC097358.2-201ENST00000607541 1159 ntBASIC20.47■□□□□ 0.87
CCDC71LQ8N9Z2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CCDC71LQ8N9Z2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CCDC71LQ8N9Z2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC71LQ8N9Z2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC71LQ8N9Z2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC71LQ8N9Z2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC71LQ8N9Z2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms