Protein–RNA interactions for Protein: Q8N9V2

TRIML1, Probable E3 ubiquitin-protein ligase TRIML1, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML1Q8N9V2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.78■■■□□ 2.04
TRIML1Q8N9V2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.78■■■□□ 2.04
TRIML1Q8N9V2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
TRIML1Q8N9V2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27.77■■■□□ 2.04
TRIML1Q8N9V2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
TRIML1Q8N9V2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
TRIML1Q8N9V2 AC145676.1-201ENST00000514988 2004 ntBASIC27.77■■■□□ 2.04
TRIML1Q8N9V2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
TRIML1Q8N9V2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
TRIML1Q8N9V2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
TRIML1Q8N9V2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
TRIML1Q8N9V2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
TRIML1Q8N9V2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
TRIML1Q8N9V2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
TRIML1Q8N9V2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
TRIML1Q8N9V2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
TRIML1Q8N9V2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
TRIML1Q8N9V2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
TRIML1Q8N9V2 AP004609.3-201ENST00000610705 1884 ntBASIC27.74■■■□□ 2.03
TRIML1Q8N9V2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TRIML1Q8N9V2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
TRIML1Q8N9V2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.73■■■□□ 2.03
TRIML1Q8N9V2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
TRIML1Q8N9V2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.72■■■□□ 2.03
TRIML1Q8N9V2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
TRIML1Q8N9V2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
TRIML1Q8N9V2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
TRIML1Q8N9V2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
TRIML1Q8N9V2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.72■■■□□ 2.03
TRIML1Q8N9V2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.71■■■□□ 2.03
TRIML1Q8N9V2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.71■■■□□ 2.03
TRIML1Q8N9V2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
TRIML1Q8N9V2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
TRIML1Q8N9V2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
TRIML1Q8N9V2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.69■■■□□ 2.02
TRIML1Q8N9V2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
TRIML1Q8N9V2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
TRIML1Q8N9V2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.69■■■□□ 2.02
TRIML1Q8N9V2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.69■■■□□ 2.02
TRIML1Q8N9V2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC27.69■■■□□ 2.02
TRIML1Q8N9V2 AC021231.2-201ENST00000594613 730 ntBASIC27.68■■■□□ 2.02
TRIML1Q8N9V2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.67■■■□□ 2.02
TRIML1Q8N9V2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
TRIML1Q8N9V2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TRIML1Q8N9V2 AC142472.1-201ENST00000612013 1741 ntBASIC27.67■■■□□ 2.02
TRIML1Q8N9V2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
TRIML1Q8N9V2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.65■■■□□ 2.02
TRIML1Q8N9V2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
TRIML1Q8N9V2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.65■■■□□ 2.02
TRIML1Q8N9V2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.65■■■□□ 2.02
TRIML1Q8N9V2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
TRIML1Q8N9V2 WHAMMP3-201ENST00000611636 1609 ntBASIC27.65■■■□□ 2.02
TRIML1Q8N9V2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.65■■■□□ 2.02
TRIML1Q8N9V2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
TRIML1Q8N9V2 DUSP8P4-201ENST00000399538 1761 ntBASIC27.64■■■□□ 2.02
TRIML1Q8N9V2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
TRIML1Q8N9V2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
TRIML1Q8N9V2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
TRIML1Q8N9V2 AC092803.2-201ENST00000564287 1899 ntBASIC27.64■■■□□ 2.01
TRIML1Q8N9V2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.63■■■□□ 2.01
TRIML1Q8N9V2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC27.63■■■□□ 2.01
TRIML1Q8N9V2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
TRIML1Q8N9V2 DUX4L29-201ENST00000425409 679 ntBASIC27.62■■■□□ 2.01
TRIML1Q8N9V2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC27.61■■■□□ 2.01
TRIML1Q8N9V2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
TRIML1Q8N9V2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
TRIML1Q8N9V2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
TRIML1Q8N9V2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
TRIML1Q8N9V2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
TRIML1Q8N9V2 ABHD17AP4-201ENST00000411545 909 ntBASIC27.59■■■□□ 2.01
TRIML1Q8N9V2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
TRIML1Q8N9V2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.58■■■□□ 2.01
TRIML1Q8N9V2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
TRIML1Q8N9V2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
TRIML1Q8N9V2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.57■■■□□ 2
TRIML1Q8N9V2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
TRIML1Q8N9V2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
TRIML1Q8N9V2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC27.57■■■□□ 2
TRIML1Q8N9V2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
TRIML1Q8N9V2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC27.57■■■□□ 2
TRIML1Q8N9V2 MIR7108-201ENST00000614319 87 ntBASIC27.56■■■□□ 2
TRIML1Q8N9V2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TRIML1Q8N9V2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TRIML1Q8N9V2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC27.55■■■□□ 2
TRIML1Q8N9V2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.55■■■□□ 2
TRIML1Q8N9V2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.55■■■□□ 2
TRIML1Q8N9V2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.55■■■□□ 2
TRIML1Q8N9V2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TRIML1Q8N9V2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
TRIML1Q8N9V2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TRIML1Q8N9V2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TRIML1Q8N9V2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
TRIML1Q8N9V2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.54■■■□□ 2
TRIML1Q8N9V2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC27.53■■■□□ 2
TRIML1Q8N9V2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
TRIML1Q8N9V2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC27.52■■■□□ 2
TRIML1Q8N9V2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC27.52■■■□□ 2
TRIML1Q8N9V2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TRIML1Q8N9V2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC27.52■■■□□ 2
TRIML1Q8N9V2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC27.52■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms