Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.38■■□□□ 1.65
PGBD3Q8N328 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
PGBD3Q8N328 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.38■■□□□ 1.65
PGBD3Q8N328 AP004833.2-201ENST00000532228 1454 ntBASIC25.38■■□□□ 1.65
PGBD3Q8N328 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PGBD3Q8N328 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.37■■□□□ 1.65
PGBD3Q8N328 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PGBD3Q8N328 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PGBD3Q8N328 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PGBD3Q8N328 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.37■■□□□ 1.65
PGBD3Q8N328 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PGBD3Q8N328 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PGBD3Q8N328 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PGBD3Q8N328 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
PGBD3Q8N328 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PGBD3Q8N328 AL157400.5-201ENST00000507624 621 ntBASIC25.36■■□□□ 1.65
PGBD3Q8N328 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.36■■□□□ 1.65
PGBD3Q8N328 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PGBD3Q8N328 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
PGBD3Q8N328 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PGBD3Q8N328 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.34■■□□□ 1.65
PGBD3Q8N328 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
PGBD3Q8N328 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.34■■□□□ 1.65
PGBD3Q8N328 AC007029.1-201ENST00000604183 313 ntBASIC25.33■■□□□ 1.65
PGBD3Q8N328 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PGBD3Q8N328 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.32■■□□□ 1.64
PGBD3Q8N328 AL359258.2-201ENST00000564063 1566 ntBASIC25.32■■□□□ 1.64
PGBD3Q8N328 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PGBD3Q8N328 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
PGBD3Q8N328 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PGBD3Q8N328 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.32■■□□□ 1.64
PGBD3Q8N328 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PGBD3Q8N328 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PGBD3Q8N328 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.32■■□□□ 1.64
PGBD3Q8N328 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.32■■□□□ 1.64
PGBD3Q8N328 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PGBD3Q8N328 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PGBD3Q8N328 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.31■■□□□ 1.64
PGBD3Q8N328 AC133552.2-201ENST00000619106 1032 ntBASIC25.31■■□□□ 1.64
PGBD3Q8N328 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PGBD3Q8N328 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PGBD3Q8N328 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PGBD3Q8N328 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PGBD3Q8N328 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.3■■□□□ 1.64
PGBD3Q8N328 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.29■■□□□ 1.64
PGBD3Q8N328 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PGBD3Q8N328 SMPD5-203ENST00000639008 1464 ntBASIC25.29■■□□□ 1.64
PGBD3Q8N328 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PGBD3Q8N328 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PGBD3Q8N328 DUX4L18-201ENST00000553347 1267 ntBASIC25.29■■□□□ 1.64
PGBD3Q8N328 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PGBD3Q8N328 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
PGBD3Q8N328 RARRES2P1-201ENST00000474487 481 ntBASIC25.28■■□□□ 1.64
PGBD3Q8N328 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.28■■□□□ 1.64
PGBD3Q8N328 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PGBD3Q8N328 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
PGBD3Q8N328 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PGBD3Q8N328 AL592293.1-201ENST00000502889 1188 ntBASIC25.27■■□□□ 1.64
PGBD3Q8N328 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PGBD3Q8N328 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PGBD3Q8N328 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PGBD3Q8N328 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
PGBD3Q8N328 AC129492.7-201ENST00000622992 756 ntBASIC25.26■■□□□ 1.63
PGBD3Q8N328 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
PGBD3Q8N328 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PGBD3Q8N328 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.25■■□□□ 1.63
PGBD3Q8N328 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
PGBD3Q8N328 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.25■■□□□ 1.63
PGBD3Q8N328 AC009831.1-201ENST00000580420 1582 ntBASIC25.25■■□□□ 1.63
PGBD3Q8N328 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.25■■□□□ 1.63
PGBD3Q8N328 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
PGBD3Q8N328 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PGBD3Q8N328 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.24■■□□□ 1.63
PGBD3Q8N328 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
PGBD3Q8N328 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
PGBD3Q8N328 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PGBD3Q8N328 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PGBD3Q8N328 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.23■■□□□ 1.63
PGBD3Q8N328 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PGBD3Q8N328 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
PGBD3Q8N328 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.23■■□□□ 1.63
PGBD3Q8N328 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.23■■□□□ 1.63
PGBD3Q8N328 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
PGBD3Q8N328 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
PGBD3Q8N328 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
PGBD3Q8N328 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
PGBD3Q8N328 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.21■■□□□ 1.63
PGBD3Q8N328 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.21■■□□□ 1.63
PGBD3Q8N328 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.21■■□□□ 1.63
PGBD3Q8N328 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
PGBD3Q8N328 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.21■■□□□ 1.63
PGBD3Q8N328 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
PGBD3Q8N328 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.2■■□□□ 1.62
PGBD3Q8N328 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.19■■□□□ 1.62
PGBD3Q8N328 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.18■■□□□ 1.62
PGBD3Q8N328 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.18■■□□□ 1.62
PGBD3Q8N328 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.18■■□□□ 1.62
PGBD3Q8N328 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
PGBD3Q8N328 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PGBD3Q8N328 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms