Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 DUSP8P4-201ENST00000399538 1761 ntBASIC19.7■□□□□ 0.74
IFNA1P01562 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IFNA1P01562 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IFNA1P01562 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
IFNA1P01562 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
IFNA1P01562 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.69■□□□□ 0.74
IFNA1P01562 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
IFNA1P01562 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
IFNA1P01562 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
IFNA1P01562 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
IFNA1P01562 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IFNA1P01562 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IFNA1P01562 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IFNA1P01562 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFNA1P01562 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFNA1P01562 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFNA1P01562 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.67■□□□□ 0.74
IFNA1P01562 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFNA1P01562 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFNA1P01562 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
IFNA1P01562 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IFNA1P01562 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
IFNA1P01562 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.64■□□□□ 0.74
IFNA1P01562 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.74
IFNA1P01562 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
IFNA1P01562 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.64■□□□□ 0.73
IFNA1P01562 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFNA1P01562 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IFNA1P01562 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFNA1P01562 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFNA1P01562 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFNA1P01562 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFNA1P01562 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFNA1P01562 AC092803.2-201ENST00000564287 1899 ntBASIC19.62■□□□□ 0.73
IFNA1P01562 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFNA1P01562 AP002414.2-202ENST00000590929 1450 ntBASIC19.62■□□□□ 0.73
IFNA1P01562 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFNA1P01562 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFNA1P01562 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.62■□□□□ 0.73
IFNA1P01562 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.62■□□□□ 0.73
IFNA1P01562 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IFNA1P01562 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFNA1P01562 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
IFNA1P01562 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFNA1P01562 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFNA1P01562 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.61■□□□□ 0.73
IFNA1P01562 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
IFNA1P01562 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
IFNA1P01562 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
IFNA1P01562 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.6■□□□□ 0.73
IFNA1P01562 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IFNA1P01562 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
IFNA1P01562 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
IFNA1P01562 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
IFNA1P01562 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IFNA1P01562 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IFNA1P01562 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IFNA1P01562 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.59■□□□□ 0.73
IFNA1P01562 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IFNA1P01562 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IFNA1P01562 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.58■□□□□ 0.72
IFNA1P01562 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IFNA1P01562 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
IFNA1P01562 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IFNA1P01562 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
IFNA1P01562 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
IFNA1P01562 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.57■□□□□ 0.72
IFNA1P01562 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
IFNA1P01562 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IFNA1P01562 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
IFNA1P01562 AC100797.4-201ENST00000631653 1827 ntBASIC19.56■□□□□ 0.72
IFNA1P01562 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IFNA1P01562 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IFNA1P01562 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.56■□□□□ 0.72
IFNA1P01562 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IFNA1P01562 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
IFNA1P01562 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IFNA1P01562 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
IFNA1P01562 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
IFNA1P01562 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
IFNA1P01562 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
IFNA1P01562 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
IFNA1P01562 AC006077.2-201ENST00000623591 457 ntBASIC19.54■□□□□ 0.72
IFNA1P01562 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
IFNA1P01562 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
IFNA1P01562 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.53■□□□□ 0.72
IFNA1P01562 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
IFNA1P01562 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
IFNA1P01562 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
IFNA1P01562 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
IFNA1P01562 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.52■□□□□ 0.72
IFNA1P01562 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
IFNA1P01562 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
IFNA1P01562 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
IFNA1P01562 AC127502.1-201ENST00000399971 1502 ntBASIC19.51■□□□□ 0.71
IFNA1P01562 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
IFNA1P01562 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IFNA1P01562 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
IFNA1P01562 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.51■□□□□ 0.71
IFNA1P01562 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms