Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TSPAN9O75954 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN9O75954 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN9O75954 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN9O75954 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.03■□□□□ 0.96
TSPAN9O75954 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TSPAN9O75954 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TSPAN9O75954 CLDN5-201ENST00000403084 2357 ntBASIC21.02■□□□□ 0.96
TSPAN9O75954 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TSPAN9O75954 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TSPAN9O75954 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TSPAN9O75954 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TSPAN9O75954 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSPAN9O75954 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TSPAN9O75954 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TSPAN9O75954 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSPAN9O75954 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TSPAN9O75954 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
TSPAN9O75954 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21■□□□□ 0.95
TSPAN9O75954 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TSPAN9O75954 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TSPAN9O75954 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21■□□□□ 0.95
TSPAN9O75954 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TSPAN9O75954 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN9O75954 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN9O75954 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN9O75954 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN9O75954 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN9O75954 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN9O75954 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN9O75954 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN9O75954 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN9O75954 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN9O75954 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TSPAN9O75954 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TSPAN9O75954 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TSPAN9O75954 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.97■□□□□ 0.95
TSPAN9O75954 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TSPAN9O75954 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.97■□□□□ 0.95
TSPAN9O75954 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TSPAN9O75954 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TSPAN9O75954 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSPAN9O75954 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSPAN9O75954 LINC01971-201ENST00000617888 1048 ntBASIC20.96■□□□□ 0.95
TSPAN9O75954 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.96■□□□□ 0.95
TSPAN9O75954 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TSPAN9O75954 ST7-AS1-201ENST00000456775 1889 ntBASIC20.96■□□□□ 0.95
TSPAN9O75954 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
TSPAN9O75954 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN9O75954 MIR639-201ENST00000384974 98 ntBASIC20.95■□□□□ 0.94
TSPAN9O75954 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TSPAN9O75954 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.95■□□□□ 0.94
TSPAN9O75954 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN9O75954 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.95■□□□□ 0.94
TSPAN9O75954 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TSPAN9O75954 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.94■□□□□ 0.94
TSPAN9O75954 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN9O75954 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
TSPAN9O75954 AL449106.1-201ENST00000608517 1980 ntBASIC20.94■□□□□ 0.94
TSPAN9O75954 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.94■□□□□ 0.94
TSPAN9O75954 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.94■□□□□ 0.94
TSPAN9O75954 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN9O75954 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.93■□□□□ 0.94
TSPAN9O75954 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.93■□□□□ 0.94
TSPAN9O75954 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TSPAN9O75954 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.93■□□□□ 0.94
TSPAN9O75954 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.93■□□□□ 0.94
TSPAN9O75954 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN9O75954 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN9O75954 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN9O75954 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.93■□□□□ 0.94
TSPAN9O75954 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN9O75954 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TSPAN9O75954 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.92■□□□□ 0.94
TSPAN9O75954 MIR4449-201ENST00000578365 66 ntBASIC20.92■□□□□ 0.94
TSPAN9O75954 MIR3648-2-201ENST00000581792 180 ntBASIC20.92■□□□□ 0.94
TSPAN9O75954 MIR3648-1-201ENST00000615959 180 ntBASIC20.92■□□□□ 0.94
TSPAN9O75954 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN9O75954 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN9O75954 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN9O75954 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN9O75954 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.92■□□□□ 0.94
TSPAN9O75954 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.92■□□□□ 0.94
TSPAN9O75954 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TSPAN9O75954 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TSPAN9O75954 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TSPAN9O75954 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.91■□□□□ 0.94
TSPAN9O75954 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.91■□□□□ 0.94
TSPAN9O75954 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
TSPAN9O75954 DUX4L11-201ENST00000611504 1267 ntBASIC20.91■□□□□ 0.94
TSPAN9O75954 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TSPAN9O75954 DUX4L12-201ENST00000614593 1267 ntBASIC20.91■□□□□ 0.94
TSPAN9O75954 DUX4L14-201ENST00000621227 1267 ntBASIC20.91■□□□□ 0.94
TSPAN9O75954 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TSPAN9O75954 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TSPAN9O75954 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TSPAN9O75954 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.9■□□□□ 0.94
TSPAN9O75954 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.9■□□□□ 0.94
TSPAN9O75954 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TSPAN9O75954 AC133561.1-201ENST00000568600 2415 ntBASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms