Protein–RNA interactions for Protein: O75569

PRKRA, Interferon-inducible double-stranded RNA-dependent protein kinase activator A, humanhuman

Known RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKRAO75569 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PRKRAO75569 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PRKRAO75569 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PRKRAO75569 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PRKRAO75569 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PRKRAO75569 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
PRKRAO75569 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PRKRAO75569 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
PRKRAO75569 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PRKRAO75569 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PRKRAO75569 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.62■■□□□ 1.37
PRKRAO75569 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.62■■□□□ 1.37
PRKRAO75569 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
PRKRAO75569 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PRKRAO75569 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.6■■□□□ 1.37
PRKRAO75569 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PRKRAO75569 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.6■■□□□ 1.37
PRKRAO75569 AC008813.1-201ENST00000536597 885 ntBASIC23.6■■□□□ 1.37
PRKRAO75569 MIR219A2-201ENST00000608502 1504 ntBASIC23.59■■□□□ 1.37
PRKRAO75569 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PRKRAO75569 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PRKRAO75569 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.59■■□□□ 1.37
PRKRAO75569 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.59■■□□□ 1.37
PRKRAO75569 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.59■■□□□ 1.37
PRKRAO75569 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
PRKRAO75569 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PRKRAO75569 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PRKRAO75569 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
PRKRAO75569 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.36
PRKRAO75569 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
PRKRAO75569 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PRKRAO75569 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.57■■□□□ 1.36
PRKRAO75569 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.57■■□□□ 1.36
PRKRAO75569 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PRKRAO75569 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PRKRAO75569 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PRKRAO75569 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PRKRAO75569 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PRKRAO75569 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
PRKRAO75569 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PRKRAO75569 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.56■■□□□ 1.36
PRKRAO75569 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.55■■□□□ 1.36
PRKRAO75569 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
PRKRAO75569 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.55■■□□□ 1.36
PRKRAO75569 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
PRKRAO75569 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.55■■□□□ 1.36
PRKRAO75569 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.55■■□□□ 1.36
PRKRAO75569 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PRKRAO75569 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.54■■□□□ 1.36
PRKRAO75569 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PRKRAO75569 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PRKRAO75569 AC148477.6-201ENST00000623746 465 ntBASIC23.54■■□□□ 1.36
PRKRAO75569 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PRKRAO75569 AL449106.1-201ENST00000608517 1980 ntBASIC23.53■■□□□ 1.36
PRKRAO75569 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
PRKRAO75569 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.53■■□□□ 1.36
PRKRAO75569 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PRKRAO75569 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.53■■□□□ 1.36
PRKRAO75569 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PRKRAO75569 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PRKRAO75569 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PRKRAO75569 MIR639-201ENST00000384974 98 ntBASIC23.52■■□□□ 1.36
PRKRAO75569 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PRKRAO75569 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PRKRAO75569 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
PRKRAO75569 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PRKRAO75569 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
PRKRAO75569 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
PRKRAO75569 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PRKRAO75569 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.5■■□□□ 1.35
PRKRAO75569 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PRKRAO75569 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PRKRAO75569 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PRKRAO75569 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PRKRAO75569 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
PRKRAO75569 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.49■■□□□ 1.35
PRKRAO75569 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.49■■□□□ 1.35
PRKRAO75569 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
PRKRAO75569 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.49■■□□□ 1.35
PRKRAO75569 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.49■■□□□ 1.35
PRKRAO75569 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PRKRAO75569 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
PRKRAO75569 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.48■■□□□ 1.35
PRKRAO75569 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.48■■□□□ 1.35
PRKRAO75569 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
PRKRAO75569 WHAMMP3-201ENST00000611636 1609 ntBASIC23.48■■□□□ 1.35
PRKRAO75569 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PRKRAO75569 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
PRKRAO75569 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PRKRAO75569 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PRKRAO75569 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PRKRAO75569 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
PRKRAO75569 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
PRKRAO75569 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.45■■□□□ 1.35
PRKRAO75569 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
PRKRAO75569 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
PRKRAO75569 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PRKRAO75569 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
PRKRAO75569 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.45■■□□□ 1.34
PRKRAO75569 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms