Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SHISA3A0PJX4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHISA3A0PJX4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHISA3A0PJX4 AC135983.2-203ENST00000454486 1613 ntBASIC21.8■■□□□ 1.08
SHISA3A0PJX4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHISA3A0PJX4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHISA3A0PJX4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SHISA3A0PJX4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SHISA3A0PJX4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHISA3A0PJX4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHISA3A0PJX4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHISA3A0PJX4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.79■■□□□ 1.08
SHISA3A0PJX4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SHISA3A0PJX4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHISA3A0PJX4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.78■■□□□ 1.08
SHISA3A0PJX4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SHISA3A0PJX4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHISA3A0PJX4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SHISA3A0PJX4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHISA3A0PJX4 AP004609.3-201ENST00000610705 1884 ntBASIC21.77■■□□□ 1.08
SHISA3A0PJX4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SHISA3A0PJX4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHISA3A0PJX4 SETD8P1-201ENST00000623146 1180 ntBASIC21.77■■□□□ 1.08
SHISA3A0PJX4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHISA3A0PJX4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHISA3A0PJX4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHISA3A0PJX4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHISA3A0PJX4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.76■■□□□ 1.07
SHISA3A0PJX4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHISA3A0PJX4 WHAMMP2-203ENST00000563942 1603 ntBASIC21.76■■□□□ 1.07
SHISA3A0PJX4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SHISA3A0PJX4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHISA3A0PJX4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.75■■□□□ 1.07
SHISA3A0PJX4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHISA3A0PJX4 AL391121.1-201ENST00000607967 1349 ntBASIC21.75■■□□□ 1.07
SHISA3A0PJX4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SHISA3A0PJX4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SHISA3A0PJX4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHISA3A0PJX4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.74■■□□□ 1.07
SHISA3A0PJX4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHISA3A0PJX4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.74■■□□□ 1.07
SHISA3A0PJX4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SHISA3A0PJX4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHISA3A0PJX4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHISA3A0PJX4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHISA3A0PJX4 ERN1-208ENST00000606895 2068 ntBASIC21.72■■□□□ 1.07
SHISA3A0PJX4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHISA3A0PJX4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SHISA3A0PJX4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.71■■□□□ 1.07
SHISA3A0PJX4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHISA3A0PJX4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHISA3A0PJX4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SHISA3A0PJX4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHISA3A0PJX4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.7■■□□□ 1.06
SHISA3A0PJX4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHISA3A0PJX4 RARRES2P7-201ENST00000567349 469 ntBASIC21.7■■□□□ 1.06
SHISA3A0PJX4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.7■■□□□ 1.06
SHISA3A0PJX4 CAHM-201ENST00000604200 896 ntBASIC21.7■■□□□ 1.06
SHISA3A0PJX4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SHISA3A0PJX4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SHISA3A0PJX4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHISA3A0PJX4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHISA3A0PJX4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHISA3A0PJX4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHISA3A0PJX4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.67■■□□□ 1.06
SHISA3A0PJX4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
SHISA3A0PJX4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHISA3A0PJX4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.66■■□□□ 1.06
SHISA3A0PJX4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHISA3A0PJX4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHISA3A0PJX4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.65■■□□□ 1.06
SHISA3A0PJX4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.65■■□□□ 1.06
SHISA3A0PJX4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHISA3A0PJX4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHISA3A0PJX4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.65■■□□□ 1.06
SHISA3A0PJX4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SHISA3A0PJX4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SHISA3A0PJX4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SHISA3A0PJX4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHISA3A0PJX4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHISA3A0PJX4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SHISA3A0PJX4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHISA3A0PJX4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SHISA3A0PJX4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHISA3A0PJX4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHISA3A0PJX4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHISA3A0PJX4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHISA3A0PJX4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SHISA3A0PJX4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHISA3A0PJX4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHISA3A0PJX4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHISA3A0PJX4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SHISA3A0PJX4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.61■■□□□ 1.05
SHISA3A0PJX4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHISA3A0PJX4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHISA3A0PJX4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
SHISA3A0PJX4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.61■■□□□ 1.05
SHISA3A0PJX4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHISA3A0PJX4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHISA3A0PJX4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms