Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV21A0A0B4J279 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.44■□□□□ 0.54
TRAV21A0A0B4J279 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.44■□□□□ 0.54
TRAV21A0A0B4J279 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV21A0A0B4J279 AC091060.1-201ENST00000623524 1766 ntBASIC18.44■□□□□ 0.54
TRAV21A0A0B4J279 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.44■□□□□ 0.54
TRAV21A0A0B4J279 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRAV21A0A0B4J279 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRAV21A0A0B4J279 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV21A0A0B4J279 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV21A0A0B4J279 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV21A0A0B4J279 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV21A0A0B4J279 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TRAV21A0A0B4J279 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.42■□□□□ 0.54
TRAV21A0A0B4J279 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV21A0A0B4J279 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV21A0A0B4J279 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV21A0A0B4J279 AP006261.1-201ENST00000584783 668 ntBASIC18.41■□□□□ 0.54
TRAV21A0A0B4J279 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV21A0A0B4J279 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV21A0A0B4J279 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
TRAV21A0A0B4J279 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV21A0A0B4J279 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV21A0A0B4J279 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV21A0A0B4J279 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV21A0A0B4J279 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV21A0A0B4J279 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV21A0A0B4J279 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
TRAV21A0A0B4J279 AC145676.1-201ENST00000514988 2004 ntBASIC18.39■□□□□ 0.53
TRAV21A0A0B4J279 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV21A0A0B4J279 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.39■□□□□ 0.53
TRAV21A0A0B4J279 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV21A0A0B4J279 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV21A0A0B4J279 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV21A0A0B4J279 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.39■□□□□ 0.53
TRAV21A0A0B4J279 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV21A0A0B4J279 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV21A0A0B4J279 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV21A0A0B4J279 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV21A0A0B4J279 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAV21A0A0B4J279 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRAV21A0A0B4J279 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV21A0A0B4J279 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRAV21A0A0B4J279 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV21A0A0B4J279 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.37■□□□□ 0.53
TRAV21A0A0B4J279 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV21A0A0B4J279 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV21A0A0B4J279 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV21A0A0B4J279 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TRAV21A0A0B4J279 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV21A0A0B4J279 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TRAV21A0A0B4J279 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAV21A0A0B4J279 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TRAV21A0A0B4J279 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV21A0A0B4J279 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TRAV21A0A0B4J279 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV21A0A0B4J279 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV21A0A0B4J279 AP004609.3-201ENST00000610705 1884 ntBASIC18.35■□□□□ 0.53
TRAV21A0A0B4J279 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV21A0A0B4J279 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV21A0A0B4J279 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV21A0A0B4J279 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TRAV21A0A0B4J279 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.34■□□□□ 0.53
TRAV21A0A0B4J279 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV21A0A0B4J279 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV21A0A0B4J279 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV21A0A0B4J279 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV21A0A0B4J279 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV21A0A0B4J279 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV21A0A0B4J279 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV21A0A0B4J279 AC110285.7-201ENST00000624417 1536 ntBASIC18.33■□□□□ 0.52
TRAV21A0A0B4J279 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV21A0A0B4J279 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TRAV21A0A0B4J279 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV21A0A0B4J279 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV21A0A0B4J279 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV21A0A0B4J279 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV21A0A0B4J279 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV21A0A0B4J279 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV21A0A0B4J279 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV21A0A0B4J279 AC044849.2-201ENST00000606596 710 ntBASIC18.3■□□□□ 0.52
TRAV21A0A0B4J279 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV21A0A0B4J279 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV21A0A0B4J279 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV21A0A0B4J279 AC087741.3-201ENST00000624270 1347 ntBASIC18.29■□□□□ 0.52
TRAV21A0A0B4J279 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAV21A0A0B4J279 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV21A0A0B4J279 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV21A0A0B4J279 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRAV21A0A0B4J279 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV21A0A0B4J279 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV21A0A0B4J279 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
TRAV21A0A0B4J279 AC092803.2-201ENST00000564287 1899 ntBASIC18.29■□□□□ 0.52
TRAV21A0A0B4J279 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRAV21A0A0B4J279 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAV21A0A0B4J279 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRAV21A0A0B4J279 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV21A0A0B4J279 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV21A0A0B4J279 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV21A0A0B4J279 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms