Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV12-3A0A0B4J271 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRAV12-3A0A0B4J271 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV12-3A0A0B4J271 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.41■□□□□ 0.54
TRAV12-3A0A0B4J271 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV12-3A0A0B4J271 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAV12-3A0A0B4J271 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV12-3A0A0B4J271 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV12-3A0A0B4J271 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV12-3A0A0B4J271 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.4■□□□□ 0.54
TRAV12-3A0A0B4J271 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV12-3A0A0B4J271 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV12-3A0A0B4J271 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV12-3A0A0B4J271 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.39■□□□□ 0.54
TRAV12-3A0A0B4J271 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
TRAV12-3A0A0B4J271 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV12-3A0A0B4J271 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV12-3A0A0B4J271 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV12-3A0A0B4J271 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TRAV12-3A0A0B4J271 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.39■□□□□ 0.53
TRAV12-3A0A0B4J271 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV12-3A0A0B4J271 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV12-3A0A0B4J271 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV12-3A0A0B4J271 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV12-3A0A0B4J271 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV12-3A0A0B4J271 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV12-3A0A0B4J271 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAV12-3A0A0B4J271 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV12-3A0A0B4J271 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV12-3A0A0B4J271 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRAV12-3A0A0B4J271 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV12-3A0A0B4J271 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV12-3A0A0B4J271 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAV12-3A0A0B4J271 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAV12-3A0A0B4J271 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV12-3A0A0B4J271 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.36■□□□□ 0.53
TRAV12-3A0A0B4J271 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.36■□□□□ 0.53
TRAV12-3A0A0B4J271 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAV12-3A0A0B4J271 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAV12-3A0A0B4J271 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TRAV12-3A0A0B4J271 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV12-3A0A0B4J271 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.35■□□□□ 0.53
TRAV12-3A0A0B4J271 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV12-3A0A0B4J271 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV12-3A0A0B4J271 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV12-3A0A0B4J271 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV12-3A0A0B4J271 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV12-3A0A0B4J271 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TRAV12-3A0A0B4J271 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV12-3A0A0B4J271 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV12-3A0A0B4J271 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TRAV12-3A0A0B4J271 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TRAV12-3A0A0B4J271 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
TRAV12-3A0A0B4J271 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV12-3A0A0B4J271 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
TRAV12-3A0A0B4J271 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV12-3A0A0B4J271 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV12-3A0A0B4J271 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.33■□□□□ 0.52
TRAV12-3A0A0B4J271 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.33■□□□□ 0.52
TRAV12-3A0A0B4J271 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV12-3A0A0B4J271 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV12-3A0A0B4J271 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TRAV12-3A0A0B4J271 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV12-3A0A0B4J271 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV12-3A0A0B4J271 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAV12-3A0A0B4J271 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV12-3A0A0B4J271 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV12-3A0A0B4J271 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV12-3A0A0B4J271 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV12-3A0A0B4J271 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV12-3A0A0B4J271 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV12-3A0A0B4J271 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV12-3A0A0B4J271 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV12-3A0A0B4J271 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TRAV12-3A0A0B4J271 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
TRAV12-3A0A0B4J271 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRAV12-3A0A0B4J271 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV12-3A0A0B4J271 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV12-3A0A0B4J271 AL449106.1-201ENST00000608517 1980 ntBASIC18.3■□□□□ 0.52
TRAV12-3A0A0B4J271 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV12-3A0A0B4J271 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV12-3A0A0B4J271 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV12-3A0A0B4J271 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV12-3A0A0B4J271 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV12-3A0A0B4J271 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV12-3A0A0B4J271 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV12-3A0A0B4J271 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV12-3A0A0B4J271 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV12-3A0A0B4J271 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV12-3A0A0B4J271 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRAV12-3A0A0B4J271 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAV12-3A0A0B4J271 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV12-3A0A0B4J271 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV12-3A0A0B4J271 LINC01971-201ENST00000617888 1048 ntBASIC18.28■□□□□ 0.52
TRAV12-3A0A0B4J271 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV12-3A0A0B4J271 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
TRAV12-3A0A0B4J271 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAV12-3A0A0B4J271 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV12-3A0A0B4J271 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TRAV12-3A0A0B4J271 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms