Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 KSR1P1-201ENST00000446298 240 ntBASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 AC008040.2-201ENST00000461049 708 ntBASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 KRT8P50-201ENST00000562022 1438 ntBASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4Y2Q8TD47 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4Y2Q8TD47 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.14■□□□□ 0.18
RPS4Y2Q8TD47 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 AC128676.1-201ENST00000454392 318 ntBASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 RPS2P4-201ENST00000476944 856 ntBASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 AC008622.2-201ENST00000617006 1229 ntBASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 AC139713.2-201ENST00000641328 2723 ntBASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 HCG11-201ENST00000411553 5696 ntBASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 AC090340.1-201ENST00000620778 4980 ntBASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.14■□□□□ 0.17
RPS4Y2Q8TD47 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4Y2Q8TD47 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4Y2Q8TD47 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.13■□□□□ 0.17
RPS4Y2Q8TD47 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RPS4Y2Q8TD47 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4Y2Q8TD47 AC110285.5-201ENST00000611501 352 ntBASIC16.13■□□□□ 0.17
RPS4Y2Q8TD47 AC011298.2-201ENST00000617989 482 ntBASIC16.13■□□□□ 0.17
RPS4Y2Q8TD47 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms