Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
LCA10Q71F78 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC9.97□□□□□ -0.81
LCA10Q71F78 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC9.97□□□□□ -0.81
LCA10Q71F78 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC9.97□□□□□ -0.81
LCA10Q71F78 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 AL691432.2-201ENST00000607222 2038 ntBASIC9.97□□□□□ -0.81
LCA10Q71F78 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC9.97□□□□□ -0.81
LCA10Q71F78 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
LCA10Q71F78 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
LCA10Q71F78 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC9.97□□□□□ -0.81
LCA10Q71F78 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC9.97□□□□□ -0.81
LCA10Q71F78 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
LCA10Q71F78 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LCA10Q71F78 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LCA10Q71F78 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC9.96□□□□□ -0.81
LCA10Q71F78 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
LCA10Q71F78 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LCA10Q71F78 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LCA10Q71F78 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC9.96□□□□□ -0.81
LCA10Q71F78 H19-201ENST00000411754 1788 ntTSL 5 BASIC9.96□□□□□ -0.81
LCA10Q71F78 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
LCA10Q71F78 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
LCA10Q71F78 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LCA10Q71F78 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LCA10Q71F78 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LCA10Q71F78 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
LCA10Q71F78 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LCA10Q71F78 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LCA10Q71F78 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LCA10Q71F78 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC9.96□□□□□ -0.81
LCA10Q71F78 ABALON-201ENST00000629058 1903 ntBASIC9.96□□□□□ -0.81
LCA10Q71F78 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
LCA10Q71F78 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC9.96□□□□□ -0.81
LCA10Q71F78 FLJ16779-201ENST00000612722 7638 ntBASIC9.96□□□□□ -0.81
LCA10Q71F78 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LCA10Q71F78 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LCA10Q71F78 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LCA10Q71F78 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
LCA10Q71F78 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LCA10Q71F78 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LCA10Q71F78 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LCA10Q71F78 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LCA10Q71F78 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LCA10Q71F78 AC027612.3-201ENST00000413684 1047 ntBASIC9.96□□□□□ -0.82
LCA10Q71F78 AC007322.3-201ENST00000426526 701 ntBASIC9.96□□□□□ -0.82
LCA10Q71F78 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LCA10Q71F78 CCDC92B-201ENST00000575506 885 ntBASIC9.96□□□□□ -0.82
LCA10Q71F78 AP001160.3-201ENST00000601484 763 ntBASIC9.96□□□□□ -0.82
LCA10Q71F78 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
LCA10Q71F78 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
LCA10Q71F78 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LCA10Q71F78 LINC02228-203ENST00000641970 1355 ntBASIC9.96□□□□□ -0.82
LCA10Q71F78 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC9.96□□□□□ -0.82
LCA10Q71F78 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LCA10Q71F78 KRT8P36-201ENST00000489121 1440 ntBASIC9.96□□□□□ -0.82
LCA10Q71F78 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
LCA10Q71F78 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC9.96□□□□□ -0.82
LCA10Q71F78 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LCA10Q71F78 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC9.96□□□□□ -0.82
LCA10Q71F78 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC9.96□□□□□ -0.82
LCA10Q71F78 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC9.96□□□□□ -0.82
LCA10Q71F78 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LCA10Q71F78 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LCA10Q71F78 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC9.96□□□□□ -0.82
LCA10Q71F78 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LCA10Q71F78 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LCA10Q71F78 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC9.96□□□□□ -0.82
LCA10Q71F78 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC9.96□□□□□ -0.82
LCA10Q71F78 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LCA10Q71F78 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LCA10Q71F78 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
LCA10Q71F78 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LCA10Q71F78 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LCA10Q71F78 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LCA10Q71F78 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
LCA10Q71F78 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LCA10Q71F78 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LCA10Q71F78 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LCA10Q71F78 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
LCA10Q71F78 AC108860.2-201ENST00000562760 2183 ntBASIC9.95□□□□□ -0.82
LCA10Q71F78 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LCA10Q71F78 PXK-206ENST00000463280 2825 ntTSL 2 BASIC9.95□□□□□ -0.82
LCA10Q71F78 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LCA10Q71F78 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC9.95□□□□□ -0.82
LCA10Q71F78 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC9.95□□□□□ -0.82
LCA10Q71F78 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
LCA10Q71F78 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LCA10Q71F78 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LCA10Q71F78 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
LCA10Q71F78 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms