Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC22.59■■□□□ 1.21
CASC1Q6TDU7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.59■■□□□ 1.21
CASC1Q6TDU7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CASC1Q6TDU7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CASC1Q6TDU7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CASC1Q6TDU7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CASC1Q6TDU7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CASC1Q6TDU7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CASC1Q6TDU7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CASC1Q6TDU7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CASC1Q6TDU7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
CASC1Q6TDU7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
CASC1Q6TDU7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CASC1Q6TDU7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
CASC1Q6TDU7 PENK-204ENST00000518770 863 ntTSL 2 BASIC22.58■■□□□ 1.21
CASC1Q6TDU7 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.58■■□□□ 1.21
CASC1Q6TDU7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.58■■□□□ 1.21
CASC1Q6TDU7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC22.58■■□□□ 1.21
CASC1Q6TDU7 AC008622.2-201ENST00000617006 1229 ntBASIC22.58■■□□□ 1.21
CASC1Q6TDU7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CASC1Q6TDU7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
CASC1Q6TDU7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
CASC1Q6TDU7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CASC1Q6TDU7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CASC1Q6TDU7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC22.58■■□□□ 1.2
CASC1Q6TDU7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CASC1Q6TDU7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CASC1Q6TDU7 TBC1D3P2-202ENST00000577902 1649 ntBASIC22.57■■□□□ 1.2
CASC1Q6TDU7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CASC1Q6TDU7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CASC1Q6TDU7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CASC1Q6TDU7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CASC1Q6TDU7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CASC1Q6TDU7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CASC1Q6TDU7 MIR564-202ENST00000385049 94 ntBASIC22.57■■□□□ 1.2
CASC1Q6TDU7 AL023284.2-201ENST00000405850 579 ntBASIC22.57■■□□□ 1.2
CASC1Q6TDU7 CA15P1-201ENST00000481698 905 ntBASIC22.57■■□□□ 1.2
CASC1Q6TDU7 GRAMD4P8-201ENST00000605465 1115 ntBASIC22.57■■□□□ 1.2
CASC1Q6TDU7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
CASC1Q6TDU7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC22.57■■□□□ 1.2
CASC1Q6TDU7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CASC1Q6TDU7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CASC1Q6TDU7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
CASC1Q6TDU7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC22.57■■□□□ 1.2
CASC1Q6TDU7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 AL355355.2-201ENST00000442321 338 ntBASIC22.56■■□□□ 1.2
CASC1Q6TDU7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 AR-207ENST00000612010 3896 ntTSL 5 BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.56■■□□□ 1.2
CASC1Q6TDU7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 GPAT2P1-201ENST00000444924 1672 ntBASIC22.55■■□□□ 1.2
CASC1Q6TDU7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 AC034236.2-201ENST00000606662 1610 ntBASIC22.55■■□□□ 1.2
CASC1Q6TDU7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 AC135776.1-201ENST00000319817 2481 ntBASIC22.55■■□□□ 1.2
CASC1Q6TDU7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CASC1Q6TDU7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms