Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC12.43□□□□□ -0.42
SNCGO76070 PTPA-214ENST00000423100 988 ntTSL 2 BASIC12.43□□□□□ -0.42
SNCGO76070 PTCHD3P2-201ENST00000424937 1205 ntBASIC12.43□□□□□ -0.42
SNCGO76070 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
SNCGO76070 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC12.43□□□□□ -0.42
SNCGO76070 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC12.43□□□□□ -0.42
SNCGO76070 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC12.43□□□□□ -0.42
SNCGO76070 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC12.43□□□□□ -0.42
SNCGO76070 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.43□□□□□ -0.42
SNCGO76070 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 NKILA-202ENST00000614771 2598 ntBASIC12.43□□□□□ -0.42
SNCGO76070 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SNCGO76070 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SNCGO76070 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SNCGO76070 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SNCGO76070 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SNCGO76070 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SNCGO76070 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.42□□□□□ -0.42
SNCGO76070 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC12.42□□□□□ -0.42
SNCGO76070 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SNCGO76070 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC12.42□□□□□ -0.42
SNCGO76070 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SNCGO76070 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 AC011676.5-201ENST00000624864 2660 ntBASIC12.42□□□□□ -0.42
SNCGO76070 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC12.42□□□□□ -0.42
SNCGO76070 SLC47A1P1-202ENST00000449666 945 ntBASIC12.42□□□□□ -0.42
SNCGO76070 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
SNCGO76070 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC12.42□□□□□ -0.42
SNCGO76070 AC011298.3-201ENST00000615796 283 ntBASIC12.42□□□□□ -0.42
SNCGO76070 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
SNCGO76070 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC12.42□□□□□ -0.42
SNCGO76070 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.42□□□□□ -0.42
SNCGO76070 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SNCGO76070 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SNCGO76070 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SNCGO76070 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC12.41□□□□□ -0.42
SNCGO76070 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SNCGO76070 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.41□□□□□ -0.42
SNCGO76070 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.41□□□□□ -0.42
SNCGO76070 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SNCGO76070 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SNCGO76070 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCGO76070 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms