Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGC4Q9Y5F7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGC4Q9Y5F7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGC4Q9Y5F7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGC4Q9Y5F7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
PCDHGC4Q9Y5F7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGC4Q9Y5F7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGC4Q9Y5F7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGC4Q9Y5F7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGC4Q9Y5F7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
PCDHGC4Q9Y5F7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 AC104581.1-202ENST00000635932 2618 ntBASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 NTF6B-201ENST00000591913 560 ntBASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 AC010331.1-201ENST00000611423 582 ntBASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC4Q9Y5F7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGC4Q9Y5F7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGC4Q9Y5F7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGC4Q9Y5F7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGC4Q9Y5F7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGC4Q9Y5F7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGC4Q9Y5F7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHGC4Q9Y5F7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHGC4Q9Y5F7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGC4Q9Y5F7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGC4Q9Y5F7 AL590326.2-201ENST00000625139 305 ntBASIC18.62■□□□□ 0.57
PCDHGC4Q9Y5F7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGC4Q9Y5F7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGC4Q9Y5F7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGC4Q9Y5F7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGC4Q9Y5F7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGC4Q9Y5F7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGC4Q9Y5F7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGC4Q9Y5F7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGC4Q9Y5F7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGC4Q9Y5F7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGC4Q9Y5F7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 AC112907.2-201ENST00000448639 330 ntBASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 AC092597.1-201ENST00000487352 616 ntBASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 LINC01238-205ENST00000567549 1107 ntBASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 MIR3180-4-201ENST00000582223 153 ntBASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC4Q9Y5F7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms