Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC7.69□□□□□ -1.185e-7■■□□□ 12.1
LARP4Q71RC2 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.245e-7■■□□□ 12.1
LARP4Q71RC2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.83e-10■■□□□ 12.1
LARP4Q71RC2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.783e-10■■□□□ 12.1
LARP4Q71RC2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.293e-10■■□□□ 12.1
LARP4Q71RC2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.083e-10■■□□□ 12.1
LARP4Q71RC2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.013e-10■■□□□ 12.1
LARP4Q71RC2 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.34□□□□□ -0.113e-10■■□□□ 12.1
LARP4Q71RC2 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.323e-10■■□□□ 12.1
LARP4Q71RC2 HMOX2-203ENST00000406590 1727 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.453e-10■■□□□ 12.1
LARP4Q71RC2 HMOX2-202ENST00000398595 1644 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.543e-10■■□□□ 12.1
LARP4Q71RC2 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC11.61□□□□□ -0.553e-10■■□□□ 12.1
LARP4Q71RC2 HMOX2-207ENST00000570622 514 ntTSL 28.32□□□□□ -1.083e-10■■□□□ 12.1
LARP4Q71RC2 LAMP1-203ENST00000472564 5242 ntTSL 216.51■□□□□ 0.231e-8■■□□□ 12.1
LARP4Q71RC2 BAX-207ENST00000502487 1346 ntTSL 1 (best)24.28■■□□□ 1.488e-8■■□□□ 12.1
LARP4Q71RC2 BAX-209ENST00000506183 383 ntTSL 1 (best)15.76■□□□□ 0.118e-8■■□□□ 12.1
LARP4Q71RC2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.25■□□□□ 0.038e-8■■□□□ 12.1
LARP4Q71RC2 BAX-204ENST00000356483 677 ntTSL 1 (best)14.55□□□□□ -0.088e-8■■□□□ 12.1
LARP4Q71RC2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.48□□□□□ -0.098e-8■■□□□ 12.1
LARP4Q71RC2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.921e-7■■□□□ 12.1
LARP4Q71RC2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.231e-7■■□□□ 12.1
LARP4Q71RC2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.091e-7■■□□□ 12.1
LARP4Q71RC2 TMEM14C-203ENST00000467415 899 ntTSL 313.4□□□□□ -0.263e-7■■□□□ 12.1
LARP4Q71RC2 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.33e-7■■□□□ 12.1
LARP4Q71RC2 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.353e-7■■□□□ 12.1
LARP4Q71RC2 NDUFS3-211ENST00000533507 1769 ntTSL 225.35■■□□□ 1.652e-6■■□□□ 12.1
LARP4Q71RC2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.479e-6■■□□□ 12.1
LARP4Q71RC2 TMUB1-206ENST00000488752 584 ntTSL 220.8■□□□□ 0.929e-6■■□□□ 12.1
LARP4Q71RC2 PTPRK-222ENST00000532751 563 ntTSL 420.19■□□□□ 0.829e-6■■□□□ 12.1
LARP4Q71RC2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.799e-6■■□□□ 12.1
LARP4Q71RC2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.9■□□□□ 0.789e-6■■□□□ 12.1
LARP4Q71RC2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.579e-6■■□□□ 12.1
LARP4Q71RC2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.59■□□□□ 0.419e-6■■□□□ 12.1
LARP4Q71RC2 POLD4-210ENST00000534515 1793 ntTSL 217.24■□□□□ 0.359e-6■■□□□ 12.1
LARP4Q71RC2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.349e-6■■□□□ 12.1
LARP4Q71RC2 POLD4-203ENST00000528087 1701 ntTSL 217.01■□□□□ 0.319e-6■■□□□ 12.1
LARP4Q71RC2 PHGDH-214ENST00000641314 1558 nt16.95■□□□□ 0.39e-6■■□□□ 12.1
LARP4Q71RC2 EIF3M-210ENST00000531921 1697 ntTSL 216.85■□□□□ 0.299e-6■■□□□ 12.1
LARP4Q71RC2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.73■□□□□ 0.279e-6■■□□□ 12.1
LARP4Q71RC2 EIF3M-211ENST00000532054 532 ntTSL 216.49■□□□□ 0.239e-6■■□□□ 12.1
LARP4Q71RC2 SCPEP1-215ENST00000576154 1915 ntTSL 216.45■□□□□ 0.229e-6■■□□□ 12.1
LARP4Q71RC2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.219e-6■■□□□ 12.1
LARP4Q71RC2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.139e-6■■□□□ 12.1
LARP4Q71RC2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.64■□□□□ 0.099e-6■■□□□ 12.1
LARP4Q71RC2 PTPRK-208ENST00000392449 1456 ntTSL 215.07■□□□□ 09e-6■■□□□ 12.1
LARP4Q71RC2 EIF3M-212ENST00000532444 633 ntTSL 515.02■□□□□ -09e-6■■□□□ 12.1
LARP4Q71RC2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.88□□□□□ -0.039e-6■■□□□ 12.1
LARP4Q71RC2 SCPEP1-214ENST00000575423 1725 ntTSL 214.63□□□□□ -0.079e-6■■□□□ 12.1
LARP4Q71RC2 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.33□□□□□ -0.129e-6■■□□□ 12.1
LARP4Q71RC2 EIF3M-201ENST00000323213 889 ntTSL 514.3□□□□□ -0.129e-6■■□□□ 12.1
LARP4Q71RC2 SCPEP1-210ENST00000573239 930 ntTSL 213.82□□□□□ -0.29e-6■■□□□ 12.1
LARP4Q71RC2 EIF3M-213ENST00000533439 749 ntTSL 513.52□□□□□ -0.259e-6■■□□□ 12.1
LARP4Q71RC2 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.299e-6■■□□□ 12.1
LARP4Q71RC2 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.319e-6■■□□□ 12.1
LARP4Q71RC2 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.98□□□□□ -0.339e-6■■□□□ 12.1
LARP4Q71RC2 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.97□□□□□ -0.339e-6■■□□□ 12.1
LARP4Q71RC2 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.369e-6■■□□□ 12.1
LARP4Q71RC2 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.83□□□□□ -0.369e-6■■□□□ 12.1
LARP4Q71RC2 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.83□□□□□ -0.369e-6■■□□□ 12.1
LARP4Q71RC2 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.389e-6■■□□□ 12.1
LARP4Q71RC2 EIF3M-209ENST00000531186 565 ntTSL 212.47□□□□□ -0.419e-6■■□□□ 12.1
LARP4Q71RC2 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC12.45□□□□□ -0.429e-6■■□□□ 12.1
LARP4Q71RC2 CUEDC2-202ENST00000465409 896 ntTSL 212.16□□□□□ -0.469e-6■■□□□ 12.1
LARP4Q71RC2 EXOSC5-205ENST00000602129 354 ntTSL 512.06□□□□□ -0.489e-6■■□□□ 12.1
LARP4Q71RC2 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC11.78□□□□□ -0.529e-6■■□□□ 12.1
LARP4Q71RC2 PTPRK-201ENST00000368202 526 ntTSL 211.68□□□□□ -0.549e-6■■□□□ 12.1
LARP4Q71RC2 SCPEP1-202ENST00000570479 924 ntTSL 211.59□□□□□ -0.559e-6■■□□□ 12.1
LARP4Q71RC2 PTPRK-217ENST00000524534 2441 ntTSL 511.58□□□□□ -0.569e-6■■□□□ 12.1
LARP4Q71RC2 PTPRK-216ENST00000524481 3157 ntTSL 211.54□□□□□ -0.569e-6■■□□□ 12.1
LARP4Q71RC2 POLD4-209ENST00000533429 860 ntTSL 1 (best)11.34□□□□□ -0.599e-6■■□□□ 12.1
LARP4Q71RC2 EIF3M-205ENST00000525782 2236 ntTSL 211.18□□□□□ -0.629e-6■■□□□ 12.1
LARP4Q71RC2 TMUB1-207ENST00000492838 550 ntTSL 510.28□□□□□ -0.769e-6■■□□□ 12.1
LARP4Q71RC2 TMEM2-204ENST00000377057 2637 ntTSL 29.99□□□□□ -0.819e-6■■□□□ 12.1
LARP4Q71RC2 EIF3M-202ENST00000524711 1645 ntTSL 29.34□□□□□ -0.919e-6■■□□□ 12.1
LARP4Q71RC2 DCTN6-201ENST00000221114 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.939e-6■■□□□ 12.1
LARP4Q71RC2 CA5A-203ENST00000568801 506 ntTSL 29.04□□□□□ -0.969e-6■■□□□ 12.1
LARP4Q71RC2 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.989e-6■■□□□ 12.1
LARP4Q71RC2 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.079e-6■■□□□ 12.1
LARP4Q71RC2 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.099e-6■■□□□ 12.1
LARP4Q71RC2 VPS29-203ENST00000546588 1059 ntTSL 3 BASIC8.14□□□□□ -1.119e-6■■□□□ 12.1
LARP4Q71RC2 DCTN6-204ENST00000522141 820 ntTSL 38.06□□□□□ -1.129e-6■■□□□ 12.1
LARP4Q71RC2 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC7.5□□□□□ -1.219e-6■■□□□ 12.1
LARP4Q71RC2 TMEM2-210ENST00000542935 5372 ntTSL 1 (best)7.5□□□□□ -1.219e-6■■□□□ 12.1
LARP4Q71RC2 EIF3M-207ENST00000530026 769 ntTSL 27.24□□□□□ -1.259e-6■■□□□ 12.1
LARP4Q71RC2 DCTN6-206ENST00000523666 878 ntTSL 56.75□□□□□ -1.339e-6■■□□□ 12.1
LARP4Q71RC2 TMEM2-209ENST00000538669 3509 ntTSL 1 (best)6.21□□□□□ -1.429e-6■■□□□ 12.1
LARP4Q71RC2 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.04□□□□□ -1.449e-6■■□□□ 12.1
LARP4Q71RC2 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.69□□□□□ -1.59e-6■■□□□ 12.1
LARP4Q71RC2 CASC3-202ENST00000394114 2792 ntTSL 25.67□□□□□ -1.59e-6■■□□□ 12.1
LARP4Q71RC2 VPS29-205ENST00000548539 598 ntTSL 35.26□□□□□ -1.579e-6■■□□□ 12.1
LARP4Q71RC2 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.589e-6■■□□□ 12.1
LARP4Q71RC2 A2M-206ENST00000495442 729 ntTSL 39.91□□□□□ -0.828e-31■■□□□ 12.1
LARP4Q71RC2 A2M-207ENST00000495709 509 ntTSL 24.64□□□□□ -1.678e-31■■□□□ 12.1
LARP4Q71RC2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.5■■□□□ 1.195e-11■■□□□ 12.1
LARP4Q71RC2 MGST1-213ENST00000539036 566 ntTSL 410.2□□□□□ -0.781e-11■■□□□ 12.1
LARP4Q71RC2 MGST1-204ENST00000396209 979 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.871e-11■■□□□ 12.1
LARP4Q71RC2 MGST1-217ENST00000542256 933 ntTSL 1 (best)9.18□□□□□ -0.941e-11■■□□□ 12.1
LARP4Q71RC2 MGST1-219ENST00000624056 1842 nt8.06□□□□□ -1.121e-11■■□□□ 12.1
LARP4Q71RC2 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.341e-11■■□□□ 12.1
LARP4Q71RC2 MGST1-208ENST00000535624 655 ntTSL 26.24□□□□□ -1.411e-11■■□□□ 12.1
Retrieved 100 of 15,922 protein–RNA pairs in 492.6 ms