RNA–Protein interactions for RNA: ENST00000465409.1

CUEDC2-202, Transcript of CUE domain containing 2, humanhuman

TSL 2

Gene CUEDC2, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-202ENST00000465409 NISCHQ9Y2I1 1504 aa31.68■■■□□ 2.66
CUEDC2-202ENST00000465409 CCDC180Q9P1Z9 1646 aa28.13■■■□□ 2.09
CUEDC2-202ENST00000465409 ABCC9O60706 1549 aa27.34■■□□□ 1.97
CUEDC2-202ENST00000465409 NACADO15069 1562 aa26.48■■□□□ 1.83
CUEDC2-202ENST00000465409 RB1CC1Q8TDY2 1594 aa26.45■■□□□ 1.82
CUEDC2-202ENST00000465409 MYO15BQ96JP2 1530 aa26.44■■□□□ 1.82
CUEDC2-202ENST00000465409 ZCCHC6Q5VYS8 1495 aaKnown RBP26.38■■□□□ 1.81
CUEDC2-202ENST00000465409 DCAF8L2P0C7V8 631 aa26.37■■□□□ 1.81
CUEDC2-202ENST00000465409 DCAF1Q9Y4B6 1507 aa26.32■■□□□ 1.8
CUEDC2-202ENST00000465409 UNC13AQ9UPW8 1703 aa25.7■■□□□ 1.7
CUEDC2-202ENST00000465409 BICRAQ9NZM4 1560 aa25.58■■□□□ 1.69
CUEDC2-202ENST00000465409 PABPN1Q86U42 306 aaKnown RBP eCLIP25.58■■□□□ 1.69
CUEDC2-202ENST00000465409 SCRIBQ14160 1630 aa25.52■■□□□ 1.68
CUEDC2-202ENST00000465409 SHROOM4Q9ULL8 1493 aa25.5■■□□□ 1.67
CUEDC2-202ENST00000465409 DNAJC5BQ9UF47 199 aa25.07■■□□□ 1.6
CUEDC2-202ENST00000465409 EIF4G1Q04637 1599 aaKnown RBP24.92■■□□□ 1.58
CUEDC2-202ENST00000465409 CC2D2AQ9P2K1 1620 aa24.77■■□□□ 1.56
CUEDC2-202ENST00000465409 CECR2Q9BXF3 1484 aa24.63■■□□□ 1.53
CUEDC2-202ENST00000465409 BAZ1AQ9NRL2 1556 aaPredicted RBP24.56■■□□□ 1.52
CUEDC2-202ENST00000465409 SMARCA4P51532 1647 aa24.51■■□□□ 1.51
CUEDC2-202ENST00000465409 NCAPD3P42695 1498 aa24.45■■□□□ 1.51
CUEDC2-202ENST00000465409 SMARCA2P51531 1590 aa24.42■■□□□ 1.5
CUEDC2-202ENST00000465409 ATAD2BQ9ULI0 1458 aa24.41■■□□□ 1.5
CUEDC2-202ENST00000465409 PEG3Q9GZU2 1588 aa24.37■■□□□ 1.49
CUEDC2-202ENST00000465409 MROH2BQ7Z745 1585 aa24.34■■□□□ 1.49
CUEDC2-202ENST00000465409 HMGXB3Q12766 1538 aa24.29■■□□□ 1.48
CUEDC2-202ENST00000465409 BAZ1BQ9UIG0 1483 aaKnown RBP24.19■■□□□ 1.46
CUEDC2-202ENST00000465409 RSF1Q96T23 1441 aaPredicted RBP24.16■■□□□ 1.46
CUEDC2-202ENST00000465409 WIZO95785 1651 aa24.05■■□□□ 1.44
CUEDC2-202ENST00000465409 TOP2AP11388 1531 aaKnown RBP23.87■■□□□ 1.41
CUEDC2-202ENST00000465409 LAMC3Q9Y6N6 1575 aa23.75■■□□□ 1.39
CUEDC2-202ENST00000465409 CADPSQ9ULU8 1353 aa23.73■■□□□ 1.39
CUEDC2-202ENST00000465409 NESP48681 1621 aa23.66■■□□□ 1.38
CUEDC2-202ENST00000465409 PDS5BQ9NTI5 1447 aa23.64■■□□□ 1.37
CUEDC2-202ENST00000465409 ERCC6Q03468 1493 aa23.61■■□□□ 1.37
CUEDC2-202ENST00000465409 CCDC88BA6NC98 1476 aa23.6■■□□□ 1.37
CUEDC2-202ENST00000465409 CFTRP13569 1480 aa23.59■■□□□ 1.37
CUEDC2-202ENST00000465409 SUPT5HO00267 1087 aaKnown RBP23.53■■□□□ 1.36
CUEDC2-202ENST00000465409 CUX2O14529 1486 aa23.42■■□□□ 1.34
CUEDC2-202ENST00000465409 FANCD2Q9BXW9 1451 aa23.38■■□□□ 1.33
CUEDC2-202ENST00000465409 KIF21AQ7Z4S6 1674 aa23.37■■□□□ 1.33
CUEDC2-202ENST00000465409 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
CUEDC2-202ENST00000465409 THOC2Q8NI27 1593 aaKnown RBP23.31■■□□□ 1.32
CUEDC2-202ENST00000465409 PRDM2Q13029 1718 aa23.31■■□□□ 1.32
CUEDC2-202ENST00000465409 MRC2Q9UBG0 1479 aa23.3■■□□□ 1.32
CUEDC2-202ENST00000465409 WDR62O43379 1518 aa23.22■■□□□ 1.31
CUEDC2-202ENST00000465409 ABCC8Q09428 1581 aa23.16■■□□□ 1.3
CUEDC2-202ENST00000465409 URB2Q14146 1524 aaKnown RBP23.11■■□□□ 1.29
CUEDC2-202ENST00000465409 TOPBP1Q92547 1522 aa23.01■■□□□ 1.27
CUEDC2-202ENST00000465409 DNMBPQ6XZF7 1577 aa23■■□□□ 1.27
CUEDC2-202ENST00000465409 IFT140Q96RY7 1462 aa22.9■■□□□ 1.26
CUEDC2-202ENST00000465409 DNAJC5Q9H3Z4 198 aa22.88■■□□□ 1.25
CUEDC2-202ENST00000465409 CUX1P39880 1505 aa22.83■■□□□ 1.25
CUEDC2-202ENST00000465409 POLA1P09884 1462 aaPredicted RBP22.82■■□□□ 1.24
CUEDC2-202ENST00000465409 SOGA1O94964 1423 aa22.78■■□□□ 1.24
CUEDC2-202ENST00000465409 WRNQ14191 1432 aaPredicted RBP eCLIP22.77■■□□□ 1.24
CUEDC2-202ENST00000465409 FGD5Q6ZNL6 1462 aa22.75■■□□□ 1.23
CUEDC2-202ENST00000465409 TARBP1Q13395 1621 aaKnown RBP22.75■■□□□ 1.23
CUEDC2-202ENST00000465409 TOP2BQ02880 1626 aa22.7■■□□□ 1.22
CUEDC2-202ENST00000465409 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
CUEDC2-202ENST00000465409 ZNF608Q9ULD9 1512 aaPredicted RBP22.68■■□□□ 1.22
CUEDC2-202ENST00000465409 BIVM-ERCC5R4GMW8 1640 aa22.68■■□□□ 1.22
CUEDC2-202ENST00000465409 RAD54L2Q9Y4B4 1467 aa22.66■■□□□ 1.22
CUEDC2-202ENST00000465409 SYNJ1O43426 1573 aa22.62■■□□□ 1.21
CUEDC2-202ENST00000465409 ABCA10Q8WWZ4 1543 aa22.61■■□□□ 1.21
CUEDC2-202ENST00000465409 AQRO60306 1485 aaKnown RBP eCLIP22.6■■□□□ 1.21
CUEDC2-202ENST00000465409 EIF4G3O43432 1585 aaKnown RBP22.59■■□□□ 1.21
CUEDC2-202ENST00000465409 TDRD9Q8NDG6 1382 aaKnown RBP22.58■■□□□ 1.21
CUEDC2-202ENST00000465409 OSCARQ8IYS5 282 aa22.51■■□□□ 1.19
CUEDC2-202ENST00000465409 GRIN2BQ13224 1484 aa22.5■■□□□ 1.19
CUEDC2-202ENST00000465409 GAPVD1Q14C86 1478 aa22.5■■□□□ 1.19
CUEDC2-202ENST00000465409 MAGI1Q96QZ7 1491 aaPredicted RBP22.45■■□□□ 1.18
CUEDC2-202ENST00000465409 ABCA5Q8WWZ7 1642 aa22.43■■□□□ 1.18
CUEDC2-202ENST00000465409 SNAPC4Q5SXM2 1469 aa22.37■■□□□ 1.17
CUEDC2-202ENST00000465409 CHMP7Q8WUX9 453 aaPredicted RBP22.36■■□□□ 1.17
CUEDC2-202ENST00000465409 ERICH3Q5RHP9 1530 aa22.36■■□□□ 1.17
CUEDC2-202ENST00000465409 SYNJ2O15056 1496 aa22.34■■□□□ 1.17
CUEDC2-202ENST00000465409 PBRM1Q86U86 1689 aa22.34■■□□□ 1.17
CUEDC2-202ENST00000465409 KIF27Q86VH2 1401 aa22.33■■□□□ 1.17
CUEDC2-202ENST00000465409 FBLN2P98095 1184 aa22.32■■□□□ 1.16
CUEDC2-202ENST00000465409 TRIM41Q8WV44 630 aa22.32■■□□□ 1.16
CUEDC2-202ENST00000465409 FHAD1B1AJZ9 1412 aa22.27■■□□□ 1.16
CUEDC2-202ENST00000465409 CHD1O14646 1710 aa22.26■■□□□ 1.15
CUEDC2-202ENST00000465409 IGF1RP08069 1367 aa22.25■■□□□ 1.15
CUEDC2-202ENST00000465409 ADAMTS12P58397 1594 aa22.2■■□□□ 1.14
CUEDC2-202ENST00000465409 GRIN2AQ12879 1464 aa22.17■■□□□ 1.14
CUEDC2-202ENST00000465409 CUL7Q14999 1698 aa22.13■■□□□ 1.13
CUEDC2-202ENST00000465409 NUP160Q12769 1436 aa22.11■■□□□ 1.13
CUEDC2-202ENST00000465409 CLASP1Q7Z460 1538 aa22.11■■□□□ 1.13
CUEDC2-202ENST00000465409 CARMIL1Q5VZK9 1371 aa22.1■■□□□ 1.13
CUEDC2-202ENST00000465409 CHIC1Q5VXU3 224 aa22.08■■□□□ 1.13
CUEDC2-202ENST00000465409 EEA1Q15075 1411 aa22.02■■□□□ 1.12
CUEDC2-202ENST00000465409 ARHGEF11O15085 1522 aa22.01■■□□□ 1.11
CUEDC2-202ENST00000465409 RUSC2Q8N2Y8 1516 aa22.01■■□□□ 1.11
CUEDC2-202ENST00000465409 CEP170Q5SW79 1584 aa21.99■■□□□ 1.11
CUEDC2-202ENST00000465409 RIMBP3CA6NJZ7 1639 aa21.97■■□□□ 1.11
CUEDC2-202ENST00000465409 RIMBP3BA6NNM3 1639 aa21.97■■□□□ 1.11
CUEDC2-202ENST00000465409 RIMBP3Q9UFD9 1639 aa21.97■■□□□ 1.11
CUEDC2-202ENST00000465409 RAPGEF2Q9Y4G8 1499 aa21.96■■□□□ 1.11
CUEDC2-202ENST00000465409 CSRNP3Q8WYN3 585 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms