RNA–Protein interactions for RNA: ENST00000533429.1

POLD4-209, Transcript of DNA polymerase delta 4, accessory subunit, humanhuman

TSL 1 (best)

Gene POLD4, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLD4-209ENST00000533429 NISCHQ9Y2I1 1504 aa31.94■■■□□ 2.7
POLD4-209ENST00000533429 ABCC9O60706 1549 aa28.94■■■□□ 2.22
POLD4-209ENST00000533429 CCDC180Q9P1Z9 1646 aa28.67■■■□□ 2.18
POLD4-209ENST00000533429 DNAJC5BQ9UF47 199 aa27.47■■□□□ 1.99
POLD4-209ENST00000533429 RB1CC1Q8TDY2 1594 aa27.43■■□□□ 1.98
POLD4-209ENST00000533429 NACADO15069 1562 aa27.23■■□□□ 1.95
POLD4-209ENST00000533429 DCAF8L2P0C7V8 631 aa26.96■■□□□ 1.91
POLD4-209ENST00000533429 PABPN1Q86U42 306 aaKnown RBP eCLIP26.94■■□□□ 1.9
POLD4-209ENST00000533429 MYO15BQ96JP2 1530 aa26.85■■□□□ 1.89
POLD4-209ENST00000533429 BICRAQ9NZM4 1560 aa26.69■■□□□ 1.86
POLD4-209ENST00000533429 UNC13AQ9UPW8 1703 aa26.69■■□□□ 1.86
POLD4-209ENST00000533429 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
POLD4-209ENST00000533429 DCAF1Q9Y4B6 1507 aa26.4■■□□□ 1.82
POLD4-209ENST00000533429 SHROOM4Q9ULL8 1493 aa26.35■■□□□ 1.81
POLD4-209ENST00000533429 CECR2Q9BXF3 1484 aa26.12■■□□□ 1.77
POLD4-209ENST00000533429 CC2D2AQ9P2K1 1620 aa26.11■■□□□ 1.77
POLD4-209ENST00000533429 SCRIBQ14160 1630 aa26.08■■□□□ 1.77
POLD4-209ENST00000533429 EIF4G1Q04637 1599 aaKnown RBP26.03■■□□□ 1.76
POLD4-209ENST00000533429 DNAJC5Q9H3Z4 198 aa25.39■■□□□ 1.66
POLD4-209ENST00000533429 NCAPD3P42695 1498 aa25.21■■□□□ 1.63
POLD4-209ENST00000533429 CUX2O14529 1486 aa25.08■■□□□ 1.6
POLD4-209ENST00000533429 ATAD2BQ9ULI0 1458 aa25.07■■□□□ 1.6
POLD4-209ENST00000533429 ERCC6Q03468 1493 aa24.97■■□□□ 1.59
POLD4-209ENST00000533429 HMGXB3Q12766 1538 aa24.93■■□□□ 1.58
POLD4-209ENST00000533429 SMARCA2P51531 1590 aa24.93■■□□□ 1.58
POLD4-209ENST00000533429 SMARCA4P51532 1647 aa24.9■■□□□ 1.58
POLD4-209ENST00000533429 NESP48681 1621 aa24.81■■□□□ 1.56
POLD4-209ENST00000533429 BAZ1AQ9NRL2 1556 aaPredicted RBP24.78■■□□□ 1.56
POLD4-209ENST00000533429 BAZ1BQ9UIG0 1483 aaKnown RBP24.75■■□□□ 1.55
POLD4-209ENST00000533429 PEG3Q9GZU2 1588 aa24.74■■□□□ 1.55
POLD4-209ENST00000533429 MROH2BQ7Z745 1585 aa24.59■■□□□ 1.53
POLD4-209ENST00000533429 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
POLD4-209ENST00000533429 THOC2Q8NI27 1593 aaKnown RBP24.58■■□□□ 1.52
POLD4-209ENST00000533429 PDS5BQ9NTI5 1447 aa24.49■■□□□ 1.51
POLD4-209ENST00000533429 CADPSQ9ULU8 1353 aa24.41■■□□□ 1.5
POLD4-209ENST00000533429 KIF21AQ7Z4S6 1674 aa24.37■■□□□ 1.49
POLD4-209ENST00000533429 MRC2Q9UBG0 1479 aa24.27■■□□□ 1.48
POLD4-209ENST00000533429 WDR62O43379 1518 aa24.23■■□□□ 1.47
POLD4-209ENST00000533429 WIZO95785 1651 aa24.21■■□□□ 1.47
POLD4-209ENST00000533429 CEP164Q9UPV0 1460 aa24.11■■□□□ 1.45
POLD4-209ENST00000533429 FANCD2Q9BXW9 1451 aa24.09■■□□□ 1.45
POLD4-209ENST00000533429 CFTRP13569 1480 aa24.08■■□□□ 1.45
POLD4-209ENST00000533429 TRIM41Q8WV44 630 aa24.05■■□□□ 1.44
POLD4-209ENST00000533429 RSF1Q96T23 1441 aaPredicted RBP24.04■■□□□ 1.44
POLD4-209ENST00000533429 TOP2AP11388 1531 aaKnown RBP23.94■■□□□ 1.42
POLD4-209ENST00000533429 URB2Q14146 1524 aaKnown RBP23.92■■□□□ 1.42
POLD4-209ENST00000533429 OSCARQ8IYS5 282 aa23.91■■□□□ 1.42
POLD4-209ENST00000533429 CCDC88BA6NC98 1476 aa23.7■■□□□ 1.38
POLD4-209ENST00000533429 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
POLD4-209ENST00000533429 ZNF608Q9ULD9 1512 aaPredicted RBP23.66■■□□□ 1.38
POLD4-209ENST00000533429 TOPBP1Q92547 1522 aa23.61■■□□□ 1.37
POLD4-209ENST00000533429 PRDM2Q13029 1718 aa23.6■■□□□ 1.37
POLD4-209ENST00000533429 ABCC8Q09428 1581 aa23.55■■□□□ 1.36
POLD4-209ENST00000533429 RIMBP3CA6NJZ7 1639 aa23.53■■□□□ 1.36
POLD4-209ENST00000533429 RIMBP3BA6NNM3 1639 aa23.53■■□□□ 1.36
POLD4-209ENST00000533429 RIMBP3Q9UFD9 1639 aa23.53■■□□□ 1.36
POLD4-209ENST00000533429 ARHGEF11O15085 1522 aa23.49■■□□□ 1.35
POLD4-209ENST00000533429 DNMBPQ6XZF7 1577 aa23.47■■□□□ 1.35
POLD4-209ENST00000533429 EIF4G3O43432 1585 aaKnown RBP23.44■■□□□ 1.34
POLD4-209ENST00000533429 AQRO60306 1485 aaKnown RBP eCLIP23.41■■□□□ 1.342e-8■■■■■ 71
POLD4-209ENST00000533429 TARBP1Q13395 1621 aaKnown RBP23.4■■□□□ 1.34
POLD4-209ENST00000533429 POLA1P09884 1462 aaPredicted RBP23.36■■□□□ 1.33
POLD4-209ENST00000533429 CYB5RLQ6IPT4 315 aa23.33■■□□□ 1.33
POLD4-209ENST00000533429 RAD54L2Q9Y4B4 1467 aa23.27■■□□□ 1.32
POLD4-209ENST00000533429 SOGA1O94964 1423 aa23.25■■□□□ 1.31
POLD4-209ENST00000533429 ARAP1Q96P48 1450 aa23.25■■□□□ 1.31
POLD4-209ENST00000533429 FBLN2P98095 1184 aa23.24■■□□□ 1.31
POLD4-209ENST00000533429 CHD1O14646 1710 aa23.24■■□□□ 1.31
POLD4-209ENST00000533429 TDRD9Q8NDG6 1382 aaKnown RBP23.24■■□□□ 1.31
POLD4-209ENST00000533429 FGD5Q6ZNL6 1462 aa23.16■■□□□ 1.3
POLD4-209ENST00000533429 WDR97A6NE52 1622 aa23.15■■□□□ 1.3
POLD4-209ENST00000533429 SNAPC4Q5SXM2 1469 aa23.14■■□□□ 1.29
POLD4-209ENST00000533429 CUX1P39880 1505 aa23.11■■□□□ 1.29
POLD4-209ENST00000533429 CLASP1Q7Z460 1538 aa23.11■■□□□ 1.29
POLD4-209ENST00000533429 TRHP20396 242 aaPredicted RBP23.09■■□□□ 1.29
POLD4-209ENST00000533429 MAGI1Q96QZ7 1491 aaPredicted RBP23.09■■□□□ 1.29
POLD4-209ENST00000533429 CHMP7Q8WUX9 453 aaPredicted RBP23.08■■□□□ 1.29
POLD4-209ENST00000533429 GRIN2BQ13224 1484 aa23.07■■□□□ 1.28
POLD4-209ENST00000533429 SYNJ2O15056 1496 aa23.02■■□□□ 1.28
POLD4-209ENST00000533429 SYNJ1O43426 1573 aa23.01■■□□□ 1.27
POLD4-209ENST00000533429 GAPVD1Q14C86 1478 aa22.94■■□□□ 1.26
POLD4-209ENST00000533429 ABCA10Q8WWZ4 1543 aa22.92■■□□□ 1.26
POLD4-209ENST00000533429 ABCA5Q8WWZ7 1642 aa22.86■■□□□ 1.25
POLD4-209ENST00000533429 PBRM1Q86U86 1689 aa22.82■■□□□ 1.24
POLD4-209ENST00000533429 WRNQ14191 1432 aaPredicted RBP eCLIP22.77■■□□□ 1.24
POLD4-209ENST00000533429 GRIN2AQ12879 1464 aa22.77■■□□□ 1.24
POLD4-209ENST00000533429 NUP160Q12769 1436 aa22.74■■□□□ 1.23
POLD4-209ENST00000533429 ERCC6L2Q5T890 1561 aa22.71■■□□□ 1.23
POLD4-209ENST00000533429 SUPT5HO00267 1087 aaKnown RBP22.7■■□□□ 1.22
POLD4-209ENST00000533429 ADAMTS12P58397 1594 aa22.69■■□□□ 1.22
POLD4-209ENST00000533429 CEP170Q5SW79 1584 aa22.67■■□□□ 1.22
POLD4-209ENST00000533429 FHAD1B1AJZ9 1412 aa22.67■■□□□ 1.22
POLD4-209ENST00000533429 TOP2BQ02880 1626 aa22.65■■□□□ 1.22
POLD4-209ENST00000533429 BIVM-ERCC5R4GMW8 1640 aa22.63■■□□□ 1.21
POLD4-209ENST00000533429 SHROOM2Q13796 1616 aa22.61■■□□□ 1.21
POLD4-209ENST00000533429 ERICH3Q5RHP9 1530 aa22.6■■□□□ 1.21
POLD4-209ENST00000533429 AEBP2Q6ZN18 517 aaPredicted RBP22.57■■□□□ 1.2
POLD4-209ENST00000533429 PRG4Q92954 1404 aaPredicted RBP22.51■■□□□ 1.19
POLD4-209ENST00000533429 JPH4Q96JJ6 628 aa22.5■■□□□ 1.19
POLD4-209ENST00000533429 RUSC2Q8N2Y8 1516 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms