Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 AC128688.1-201ENST00000487626 519 ntBASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 AC126763.1-201ENST00000552015 2118 ntBASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 MIR3180-5-201ENST00000583743 153 ntBASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 RNF165-205ENST00000588679 2904 ntBASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 RNF152P1-201ENST00000397754 604 ntBASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 AC010653.2-201ENST00000623505 997 ntBASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 AC036111.1-201ENST00000533973 1582 ntBASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERC4Q5GLZ8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 FAM87A-204ENST00000613235 858 ntBASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 AC009113.1-201ENST00000570267 2443 ntBASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HERC4Q5GLZ8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HERC4Q5GLZ8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
HERC4Q5GLZ8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HERC4Q5GLZ8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
HERC4Q5GLZ8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
HERC4Q5GLZ8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HERC4Q5GLZ8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HERC4Q5GLZ8 AC112777.1-201ENST00000540175 1423 ntBASIC20.64■□□□□ 0.89
HERC4Q5GLZ8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HERC4Q5GLZ8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.64■□□□□ 0.89
HERC4Q5GLZ8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HERC4Q5GLZ8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HERC4Q5GLZ8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.64■□□□□ 0.89
HERC4Q5GLZ8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.64■□□□□ 0.89
HERC4Q5GLZ8 CR769767.2-201ENST00000622735 460 ntBASIC20.64■□□□□ 0.89
HERC4Q5GLZ8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms