Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.12■□□□□ 0.33
PER3P56645 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.12■□□□□ 0.33
PER3P56645 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.12■□□□□ 0.33
PER3P56645 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 STARP1-201ENST00000397973 869 ntBASIC17.12■□□□□ 0.33
PER3P56645 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.12■□□□□ 0.33
PER3P56645 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.12■□□□□ 0.33
PER3P56645 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.12■□□□□ 0.33
PER3P56645 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.12■□□□□ 0.33
PER3P56645 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.12■□□□□ 0.33
PER3P56645 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.12■□□□□ 0.33
PER3P56645 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 LINC01311-201ENST00000565162 1445 ntBASIC17.12■□□□□ 0.33
PER3P56645 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.12■□□□□ 0.33
PER3P56645 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PER3P56645 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PER3P56645 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.11■□□□□ 0.33
PER3P56645 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PER3P56645 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PER3P56645 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.11■□□□□ 0.33
PER3P56645 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.11■□□□□ 0.33
PER3P56645 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PER3P56645 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PER3P56645 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.11■□□□□ 0.33
PER3P56645 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PER3P56645 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PER3P56645 KRT18P38-201ENST00000449496 1282 ntBASIC17.11■□□□□ 0.33
PER3P56645 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.11■□□□□ 0.33
PER3P56645 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PER3P56645 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.11■□□□□ 0.33
PER3P56645 MIR3652-201ENST00000579335 131 ntBASIC17.11■□□□□ 0.33
PER3P56645 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.11■□□□□ 0.33
PER3P56645 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.11■□□□□ 0.33
PER3P56645 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PER3P56645 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.11■□□□□ 0.33
PER3P56645 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.11■□□□□ 0.33
PER3P56645 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PER3P56645 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PER3P56645 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PER3P56645 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PER3P56645 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.11■□□□□ 0.33
PER3P56645 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PER3P56645 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.11■□□□□ 0.33
PER3P56645 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PER3P56645 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.11■□□□□ 0.33
PER3P56645 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.11■□□□□ 0.33
PER3P56645 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PER3P56645 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PER3P56645 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PER3P56645 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.11■□□□□ 0.33
PER3P56645 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
PER3P56645 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.11■□□□□ 0.33
PER3P56645 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PER3P56645 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PER3P56645 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PER3P56645 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.1■□□□□ 0.33
PER3P56645 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.1■□□□□ 0.33
PER3P56645 AL138781.2-201ENST00000617896 1843 ntBASIC17.1■□□□□ 0.33
PER3P56645 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PER3P56645 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.1■□□□□ 0.33
PER3P56645 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PER3P56645 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.1■□□□□ 0.33
PER3P56645 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PER3P56645 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PER3P56645 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PER3P56645 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.1■□□□□ 0.33
PER3P56645 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
PER3P56645 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
PER3P56645 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PER3P56645 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PER3P56645 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PER3P56645 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.1■□□□□ 0.33
PER3P56645 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.1■□□□□ 0.33
PER3P56645 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.1■□□□□ 0.33
PER3P56645 CKBP1-201ENST00000565489 1086 ntBASIC17.1■□□□□ 0.33
PER3P56645 AC111152.3-201ENST00000569699 673 ntBASIC17.1■□□□□ 0.33
PER3P56645 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.1■□□□□ 0.33
PER3P56645 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PER3P56645 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.1■□□□□ 0.33
PER3P56645 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms