Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
UBL4AP11441 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.12■□□□□ 0.33
UBL4AP11441 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBL4AP11441 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
UBL4AP11441 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBL4AP11441 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBL4AP11441 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBL4AP11441 MMP23A-201ENST00000234610 1017 ntBASIC17.12■□□□□ 0.33
UBL4AP11441 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBL4AP11441 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBL4AP11441 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.12■□□□□ 0.33
UBL4AP11441 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.12■□□□□ 0.33
UBL4AP11441 AL353719.1-201ENST00000566847 864 ntBASIC17.12■□□□□ 0.33
UBL4AP11441 MYC-208ENST00000641036 567 ntBASIC17.12■□□□□ 0.33
UBL4AP11441 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBL4AP11441 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
UBL4AP11441 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.12■□□□□ 0.33
UBL4AP11441 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBL4AP11441 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
UBL4AP11441 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.12■□□□□ 0.33
UBL4AP11441 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBL4AP11441 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBL4AP11441 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
UBL4AP11441 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBL4AP11441 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBL4AP11441 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBL4AP11441 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
UBL4AP11441 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBL4AP11441 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBL4AP11441 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
UBL4AP11441 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.11■□□□□ 0.33
UBL4AP11441 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.11■□□□□ 0.33
UBL4AP11441 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBL4AP11441 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
UBL4AP11441 AP003041.3-201ENST00000527151 707 ntBASIC17.11■□□□□ 0.33
UBL4AP11441 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBL4AP11441 BX088651.1-201ENST00000540551 451 ntBASIC17.11■□□□□ 0.33
UBL4AP11441 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.11■□□□□ 0.33
UBL4AP11441 NAPSB-206ENST00000562112 1266 ntBASIC17.11■□□□□ 0.33
UBL4AP11441 MIR4674-201ENST00000582457 87 ntBASIC17.11■□□□□ 0.33
UBL4AP11441 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.11■□□□□ 0.33
UBL4AP11441 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.11■□□□□ 0.33
UBL4AP11441 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.11■□□□□ 0.33
UBL4AP11441 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.11■□□□□ 0.33
UBL4AP11441 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.11■□□□□ 0.33
UBL4AP11441 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBL4AP11441 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBL4AP11441 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBL4AP11441 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBL4AP11441 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBL4AP11441 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
UBL4AP11441 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.11■□□□□ 0.33
UBL4AP11441 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
UBL4AP11441 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBL4AP11441 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBL4AP11441 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
UBL4AP11441 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
UBL4AP11441 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
UBL4AP11441 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBL4AP11441 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
UBL4AP11441 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBL4AP11441 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.1■□□□□ 0.33
UBL4AP11441 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.1■□□□□ 0.33
UBL4AP11441 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
UBL4AP11441 TSPY14P-201ENST00000303979 915 ntBASIC17.1■□□□□ 0.33
UBL4AP11441 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
UBL4AP11441 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBL4AP11441 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.1■□□□□ 0.33
UBL4AP11441 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
UBL4AP11441 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.1■□□□□ 0.33
UBL4AP11441 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBL4AP11441 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.1■□□□□ 0.33
UBL4AP11441 MIR3180-5-201ENST00000583743 153 ntBASIC17.1■□□□□ 0.33
UBL4AP11441 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.1■□□□□ 0.33
UBL4AP11441 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBL4AP11441 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBL4AP11441 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBL4AP11441 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBL4AP11441 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
UBL4AP11441 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.1■□□□□ 0.33
UBL4AP11441 AC092338.2-201ENST00000568827 1415 ntBASIC17.1■□□□□ 0.33
UBL4AP11441 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBL4AP11441 AL391005.1-201ENST00000623953 2435 ntBASIC17.1■□□□□ 0.33
UBL4AP11441 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.1■□□□□ 0.33
UBL4AP11441 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBL4AP11441 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBL4AP11441 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
UBL4AP11441 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBL4AP11441 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.1■□□□□ 0.33
UBL4AP11441 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBL4AP11441 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBL4AP11441 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
UBL4AP11441 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBL4AP11441 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBL4AP11441 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBL4AP11441 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBL4AP11441 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBL4AP11441 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
UBL4AP11441 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBL4AP11441 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms