Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 AC008622.2-201ENST00000617006 1229 ntBASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 MCCD1P1-208ENST00000445732 328 ntBASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 AC140113.3-201ENST00000605663 199 ntBASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 AL031432.5-201ENST00000641059 760 ntBASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 AL357033.4-201ENST00000617703 1807 ntBASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHB1Q9Y5F3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 AC005332.1-201ENST00000577698 1310 ntBASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 AL023284.2-201ENST00000405850 579 ntBASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 HCG4P8-203ENST00000443049 980 ntBASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 KRT18P38-201ENST00000449496 1282 ntBASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
PCDHB1Q9Y5F3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHB1Q9Y5F3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHB1Q9Y5F3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHB1Q9Y5F3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHB1Q9Y5F3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
PCDHB1Q9Y5F3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHB1Q9Y5F3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHB1Q9Y5F3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHB1Q9Y5F3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 AC112777.1-201ENST00000540175 1423 ntBASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 AL512604.3-201ENST00000569583 964 ntBASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms