Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.1■□□□□ 0.17
HIST1H2AAQ96QV6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.1■□□□□ 0.17
HIST1H2AAQ96QV6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.1■□□□□ 0.17
HIST1H2AAQ96QV6 MYC-208ENST00000641036 567 ntBASIC16.1■□□□□ 0.17
HIST1H2AAQ96QV6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST1H2AAQ96QV6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.1■□□□□ 0.17
HIST1H2AAQ96QV6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
HIST1H2AAQ96QV6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST1H2AAQ96QV6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HIST1H2AAQ96QV6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H2AAQ96QV6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H2AAQ96QV6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H2AAQ96QV6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 AC116562.2-201ENST00000507042 360 ntBASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 AC097488.1-201ENST00000507834 756 ntBASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 KRT8P32-201ENST00000512863 1461 ntBASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2AAQ96QV6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.08■□□□□ 0.17
HIST1H2AAQ96QV6 WIZP1-201ENST00000531444 2299 ntBASIC16.08■□□□□ 0.17
HIST1H2AAQ96QV6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
HIST1H2AAQ96QV6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H2AAQ96QV6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H2AAQ96QV6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.08■□□□□ 0.17
HIST1H2AAQ96QV6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H2AAQ96QV6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
HIST1H2AAQ96QV6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.17
HIST1H2AAQ96QV6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 AC113410.3-201ENST00000623366 203 ntBASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.08■□□□□ 0.16
HIST1H2AAQ96QV6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms