Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF544Q6NX49 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ZNF544Q6NX49 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF544Q6NX49 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF544Q6NX49 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF544Q6NX49 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF544Q6NX49 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF544Q6NX49 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ZNF544Q6NX49 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF544Q6NX49 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
ZNF544Q6NX49 ZNF815P-204ENST00000434898 1737 ntBASIC17.04■□□□□ 0.32
ZNF544Q6NX49 AC067852.2-201ENST00000590513 2313 ntBASIC17.04■□□□□ 0.32
ZNF544Q6NX49 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 WIZP1-201ENST00000531444 2299 ntBASIC17.04■□□□□ 0.32
ZNF544Q6NX49 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 TFP1-202ENST00000475455 1573 ntBASIC17.04■□□□□ 0.32
ZNF544Q6NX49 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF544Q6NX49 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 AC124067.4-201ENST00000519691 2379 ntBASIC17.03■□□□□ 0.32
ZNF544Q6NX49 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNF544Q6NX49 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF544Q6NX49 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF544Q6NX49 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF544Q6NX49 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
ZNF544Q6NX49 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.02■□□□□ 0.32
ZNF544Q6NX49 HTR7P1-201ENST00000538670 1336 ntBASIC17.02■□□□□ 0.32
ZNF544Q6NX49 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
ZNF544Q6NX49 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF544Q6NX49 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF544Q6NX49 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF544Q6NX49 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF544Q6NX49 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF544Q6NX49 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF544Q6NX49 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF544Q6NX49 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF544Q6NX49 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF544Q6NX49 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
ZNF544Q6NX49 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.02■□□□□ 0.32
ZNF544Q6NX49 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF544Q6NX49 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ZNF544Q6NX49 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms