Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM3O75382 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM3O75382 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM3O75382 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM3O75382 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM3O75382 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM3O75382 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
TRIM3O75382 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRIM3O75382 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM3O75382 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM3O75382 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM3O75382 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM3O75382 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
TRIM3O75382 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM3O75382 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM3O75382 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM3O75382 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM3O75382 LIN28AP1-201ENST00000429574 405 ntBASIC17.29■□□□□ 0.36
TRIM3O75382 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM3O75382 KRT18P57-201ENST00000443599 1254 ntBASIC17.29■□□□□ 0.36
TRIM3O75382 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM3O75382 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM3O75382 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.29■□□□□ 0.36
TRIM3O75382 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM3O75382 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM3O75382 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM3O75382 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM3O75382 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM3O75382 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM3O75382 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRIM3O75382 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM3O75382 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM3O75382 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM3O75382 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TRIM3O75382 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM3O75382 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRIM3O75382 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRIM3O75382 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM3O75382 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM3O75382 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM3O75382 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
TRIM3O75382 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM3O75382 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM3O75382 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM3O75382 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM3O75382 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
TRIM3O75382 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM3O75382 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM3O75382 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRIM3O75382 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM3O75382 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM3O75382 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM3O75382 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM3O75382 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.28■□□□□ 0.36
TRIM3O75382 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM3O75382 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM3O75382 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM3O75382 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM3O75382 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM3O75382 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM3O75382 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
TRIM3O75382 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.28■□□□□ 0.36
TRIM3O75382 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM3O75382 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM3O75382 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRIM3O75382 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM3O75382 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM3O75382 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM3O75382 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM3O75382 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM3O75382 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM3O75382 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.28■□□□□ 0.36
TRIM3O75382 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM3O75382 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM3O75382 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM3O75382 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM3O75382 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM3O75382 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM3O75382 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM3O75382 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
TRIM3O75382 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM3O75382 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRIM3O75382 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM3O75382 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM3O75382 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM3O75382 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM3O75382 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM3O75382 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM3O75382 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM3O75382 ATP5G1P1-201ENST00000448724 379 ntBASIC17.27■□□□□ 0.36
TRIM3O75382 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM3O75382 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.27■□□□□ 0.36
TRIM3O75382 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM3O75382 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM3O75382 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
TRIM3O75382 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRIM3O75382 AL138966.2-201ENST00000621997 464 ntBASIC17.27■□□□□ 0.36
TRIM3O75382 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM3O75382 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRIM3O75382 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms