Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.04■□□□□ 0.8
SNX27Q96L92 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SNX27Q96L92 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.04■□□□□ 0.8
SNX27Q96L92 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.04■□□□□ 0.8
SNX27Q96L92 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SNX27Q96L92 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNX27Q96L92 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX27Q96L92 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.03■□□□□ 0.8
SNX27Q96L92 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNX27Q96L92 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX27Q96L92 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNX27Q96L92 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.03■□□□□ 0.8
SNX27Q96L92 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNX27Q96L92 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX27Q96L92 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNX27Q96L92 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX27Q96L92 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.03■□□□□ 0.8
SNX27Q96L92 AL022342.1-201ENST00000400363 863 ntBASIC20.03■□□□□ 0.8
SNX27Q96L92 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.03■□□□□ 0.8
SNX27Q96L92 HMGN1P19-201ENST00000436976 333 ntBASIC20.03■□□□□ 0.8
SNX27Q96L92 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.03■□□□□ 0.8
SNX27Q96L92 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SNX27Q96L92 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX27Q96L92 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SNX27Q96L92 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX27Q96L92 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNX27Q96L92 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX27Q96L92 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX27Q96L92 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNX27Q96L92 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX27Q96L92 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.02■□□□□ 0.8
SNX27Q96L92 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.02■□□□□ 0.8
SNX27Q96L92 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX27Q96L92 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.02■□□□□ 0.8
SNX27Q96L92 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNX27Q96L92 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SNX27Q96L92 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
SNX27Q96L92 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SNX27Q96L92 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
SNX27Q96L92 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SNX27Q96L92 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SNX27Q96L92 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
SNX27Q96L92 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.02■□□□□ 0.79
SNX27Q96L92 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
SNX27Q96L92 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNX27Q96L92 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNX27Q96L92 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
SNX27Q96L92 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNX27Q96L92 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX27Q96L92 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.01■□□□□ 0.79
SNX27Q96L92 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNX27Q96L92 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
SNX27Q96L92 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNX27Q96L92 AC092183.1-201ENST00000469884 875 ntBASIC20.01■□□□□ 0.79
SNX27Q96L92 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.01■□□□□ 0.79
SNX27Q96L92 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.01■□□□□ 0.79
SNX27Q96L92 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.01■□□□□ 0.79
SNX27Q96L92 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.01■□□□□ 0.79
SNX27Q96L92 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.01■□□□□ 0.79
SNX27Q96L92 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX27Q96L92 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX27Q96L92 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.01■□□□□ 0.79
SNX27Q96L92 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SNX27Q96L92 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
SNX27Q96L92 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX27Q96L92 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SNX27Q96L92 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SNX27Q96L92 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNX27Q96L92 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20■□□□□ 0.79
SNX27Q96L92 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20■□□□□ 0.79
SNX27Q96L92 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SNX27Q96L92 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SNX27Q96L92 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20■□□□□ 0.79
SNX27Q96L92 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNX27Q96L92 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNX27Q96L92 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20■□□□□ 0.79
SNX27Q96L92 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SNX27Q96L92 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20■□□□□ 0.79
SNX27Q96L92 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SNX27Q96L92 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SNX27Q96L92 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SNX27Q96L92 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNX27Q96L92 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SNX27Q96L92 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNX27Q96L92 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNX27Q96L92 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20■□□□□ 0.79
SNX27Q96L92 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX27Q96L92 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.99■□□□□ 0.79
SNX27Q96L92 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX27Q96L92 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNX27Q96L92 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.99■□□□□ 0.79
SNX27Q96L92 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNX27Q96L92 AL163051.1-201ENST00000569214 1512 ntBASIC19.99■□□□□ 0.79
SNX27Q96L92 MIR662-201ENST00000384847 95 ntBASIC19.99■□□□□ 0.79
SNX27Q96L92 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.99■□□□□ 0.79
SNX27Q96L92 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNX27Q96L92 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNX27Q96L92 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.99■□□□□ 0.79
SNX27Q96L92 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNX27Q96L92 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms