Protein–RNA interactions for Protein: Q96A83

COL26A1, Collagen alpha-1(XXVI) chain, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL26A1Q96A83 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COL26A1Q96A83 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL26A1Q96A83 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL26A1Q96A83 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.95■□□□□ 0.46
COL26A1Q96A83 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COL26A1Q96A83 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COL26A1Q96A83 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL26A1Q96A83 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL26A1Q96A83 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL26A1Q96A83 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.95■□□□□ 0.46
COL26A1Q96A83 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.95■□□□□ 0.46
COL26A1Q96A83 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL26A1Q96A83 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.95■□□□□ 0.46
COL26A1Q96A83 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
COL26A1Q96A83 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL26A1Q96A83 AL512604.3-201ENST00000569583 964 ntBASIC17.95■□□□□ 0.46
COL26A1Q96A83 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.95■□□□□ 0.46
COL26A1Q96A83 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.95■□□□□ 0.46
COL26A1Q96A83 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
COL26A1Q96A83 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.95■□□□□ 0.46
COL26A1Q96A83 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COL26A1Q96A83 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL26A1Q96A83 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL26A1Q96A83 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
COL26A1Q96A83 IRX1P1-201ENST00000438849 1838 ntBASIC17.95■□□□□ 0.46
COL26A1Q96A83 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL26A1Q96A83 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL26A1Q96A83 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL26A1Q96A83 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
COL26A1Q96A83 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL26A1Q96A83 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.95■□□□□ 0.46
COL26A1Q96A83 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL26A1Q96A83 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL26A1Q96A83 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
COL26A1Q96A83 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL26A1Q96A83 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.94■□□□□ 0.46
COL26A1Q96A83 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL26A1Q96A83 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.94■□□□□ 0.46
COL26A1Q96A83 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL26A1Q96A83 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL26A1Q96A83 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.94■□□□□ 0.46
COL26A1Q96A83 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.94■□□□□ 0.46
COL26A1Q96A83 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.94■□□□□ 0.46
COL26A1Q96A83 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.94■□□□□ 0.46
COL26A1Q96A83 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.94■□□□□ 0.46
COL26A1Q96A83 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.94■□□□□ 0.46
COL26A1Q96A83 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.94■□□□□ 0.46
COL26A1Q96A83 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.94■□□□□ 0.46
COL26A1Q96A83 AL390719.2-201ENST00000606993 987 ntBASIC17.94■□□□□ 0.46
COL26A1Q96A83 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.94■□□□□ 0.46
COL26A1Q96A83 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.94■□□□□ 0.46
COL26A1Q96A83 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL26A1Q96A83 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL26A1Q96A83 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL26A1Q96A83 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL26A1Q96A83 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL26A1Q96A83 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.93■□□□□ 0.46
COL26A1Q96A83 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL26A1Q96A83 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL26A1Q96A83 IER3-202ENST00000376377 1350 ntBASIC17.93■□□□□ 0.46
COL26A1Q96A83 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
COL26A1Q96A83 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL26A1Q96A83 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.93■□□□□ 0.46
COL26A1Q96A83 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.93■□□□□ 0.46
COL26A1Q96A83 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
COL26A1Q96A83 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL26A1Q96A83 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL26A1Q96A83 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL26A1Q96A83 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.93■□□□□ 0.46
COL26A1Q96A83 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL26A1Q96A83 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.93■□□□□ 0.46
COL26A1Q96A83 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
COL26A1Q96A83 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL26A1Q96A83 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.93■□□□□ 0.46
COL26A1Q96A83 AC008622.2-201ENST00000617006 1229 ntBASIC17.93■□□□□ 0.46
COL26A1Q96A83 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL26A1Q96A83 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL26A1Q96A83 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.93■□□□□ 0.46
COL26A1Q96A83 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL26A1Q96A83 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.93■□□□□ 0.46
COL26A1Q96A83 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL26A1Q96A83 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL26A1Q96A83 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.93■□□□□ 0.46
COL26A1Q96A83 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL26A1Q96A83 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.93■□□□□ 0.46
COL26A1Q96A83 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.93■□□□□ 0.46
COL26A1Q96A83 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
COL26A1Q96A83 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL26A1Q96A83 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL26A1Q96A83 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL26A1Q96A83 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
COL26A1Q96A83 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL26A1Q96A83 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
COL26A1Q96A83 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.92■□□□□ 0.46
COL26A1Q96A83 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL26A1Q96A83 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL26A1Q96A83 FP475955.4-201ENST00000623131 1990 ntBASIC17.92■□□□□ 0.46
COL26A1Q96A83 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
COL26A1Q96A83 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
COL26A1Q96A83 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms