Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 LINC00896-202ENST00000609602 2128 ntBASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 AC068587.9-201ENST00000641814 219 ntBASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 AC134043.2-201ENST00000624206 2238 ntBASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 AC097658.1-201ENST00000475555 843 ntBASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 PRORSD1P-202ENST00000563365 2154 ntBASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TRIM42Q8IWZ5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 AC138028.4-201ENST00000564984 1845 ntBASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 DUSP5P2-201ENST00000426873 1033 ntBASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 KRT18P6-201ENST00000555540 1265 ntBASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRIM42Q8IWZ5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.52■□□□□ 0.55
TRIM42Q8IWZ5 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM42Q8IWZ5 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM42Q8IWZ5 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
TRIM42Q8IWZ5 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM42Q8IWZ5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.52■□□□□ 0.55
TRIM42Q8IWZ5 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 SIRPAP1-201ENST00000448467 1770 ntBASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 AC091874.3-201ENST00000512672 1195 ntBASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 AL499627.1-201ENST00000569373 2188 ntBASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms