Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 GABBR1-207ENST00000467259 1252 ntTSL 222.75■■□□□ 1.236e-6■□□□□ 11
SRSF1Q07955 GABBR1-213ENST00000485508 825 ntTSL 520.41■□□□□ 0.866e-6■□□□□ 11
SRSF1Q07955 GABBR1-216ENST00000489385 871 ntTSL 520.31■□□□□ 0.846e-6■□□□□ 11
SRSF1Q07955 GABBR1-210ENST00000476670 487 ntTSL 420.26■□□□□ 0.836e-6■□□□□ 11
SRSF1Q07955 GCFC2-204ENST00000442309 642 ntTSL 519.89■□□□□ 0.777e-11■□□□□ 11
SRSF1Q07955 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.09■□□□□ 0.657e-11■□□□□ 11
SRSF1Q07955 TRIP6-208ENST00000496260 451 ntTSL 417.4■□□□□ 0.386e-6■□□□□ 11
SRSF1Q07955 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.83■□□□□ 0.286e-6■□□□□ 11
SRSF1Q07955 MON2-208ENST00000549378 1689 ntTSL 1 (best)16.75■□□□□ 0.276e-6■□□□□ 11
SRSF1Q07955 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.246e-6■□□□□ 11
SRSF1Q07955 TRIP6-202ENST00000417475 992 ntTSL 1 (best)16.15■□□□□ 0.186e-6■□□□□ 11
SRSF1Q07955 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.136e-6■□□□□ 11
SRSF1Q07955 TRIP6-206ENST00000476870 1750 ntTSL 215.47■□□□□ 0.076e-6■□□□□ 11
SRSF1Q07955 GABBR1-206ENST00000462632 609 ntTSL 415.12■□□□□ 0.016e-6■□□□□ 11
SRSF1Q07955 SCYL2-204ENST00000548392 790 ntTSL 415.04■□□□□ -06e-6■□□□□ 11
SRSF1Q07955 GABBR1-208ENST00000472823 4286 ntTSL 515□□□□□ -0.016e-6■□□□□ 11
SRSF1Q07955 TRIP6-204ENST00000437505 875 ntTSL 314.79□□□□□ -0.046e-6■□□□□ 11
SRSF1Q07955 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.78□□□□□ -0.046e-6■□□□□ 11
SRSF1Q07955 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.57□□□□□ -0.087e-11■□□□□ 11
SRSF1Q07955 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.57□□□□□ -0.086e-6■□□□□ 11
SRSF1Q07955 KLF6-203ENST00000461124 764 ntTSL 514.46□□□□□ -0.096e-6■□□□□ 11
SRSF1Q07955 CDC42SE1-205ENST00000491825 837 ntTSL 214.43□□□□□ -0.16e-6■□□□□ 11
SRSF1Q07955 MON2-205ENST00000547095 5708 ntTSL 1 (best)13.86□□□□□ -0.196e-6■□□□□ 11
SRSF1Q07955 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.26e-6■□□□□ 11
SRSF1Q07955 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.26e-6■□□□□ 11
SRSF1Q07955 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.74□□□□□ -0.216e-6■□□□□ 11
SRSF1Q07955 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.48□□□□□ -0.256e-6■□□□□ 11
SRSF1Q07955 GABBR1-220ENST00000494877 2364 ntTSL 513.43□□□□□ -0.266e-6■□□□□ 11
SRSF1Q07955 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.42□□□□□ -0.266e-6■□□□□ 11
SRSF1Q07955 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.427e-11■□□□□ 11
SRSF1Q07955 MON2-207ENST00000549286 424 ntTSL 512.37□□□□□ -0.436e-6■□□□□ 11
SRSF1Q07955 KLF6-201ENST00000173785 925 ntTSL 212.12□□□□□ -0.476e-6■□□□□ 11
SRSF1Q07955 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.48□□□□□ -0.577e-11■□□□□ 11
SRSF1Q07955 GABBR1-218ENST00000491829 4212 ntTSL 510.66□□□□□ -0.76e-6■□□□□ 11
SRSF1Q07955 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.716e-6■□□□□ 11
SRSF1Q07955 SCYL2-208ENST00000550067 557 ntTSL 410.58□□□□□ -0.726e-6■□□□□ 11
SRSF1Q07955 SCYL2-207ENST00000549687 2328 ntTSL 210.41□□□□□ -0.746e-6■□□□□ 11
SRSF1Q07955 KLF6-206ENST00000497571 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.816e-6■□□□□ 11
SRSF1Q07955 MON2-212ENST00000552115 3760 ntTSL 5 BASIC9.44□□□□□ -0.96e-6■□□□□ 11
SRSF1Q07955 KLF6-207ENST00000542957 4537 ntTSL 5 BASIC9.42□□□□□ -0.96e-6■□□□□ 11
SRSF1Q07955 MTDH-206ENST00000522313 672 ntTSL 49.3□□□□□ -0.926e-6■□□□□ 11
SRSF1Q07955 MON2-214ENST00000641654 10382 ntBASIC9.01□□□□□ -0.976e-6■□□□□ 11
SRSF1Q07955 MDC1-201ENST00000376406 7576 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.976e-6■□□□□ 11
SRSF1Q07955 HDAC1-204ENST00000471488 726 ntTSL 57.18□□□□□ -1.266e-6■□□□□ 11
SRSF1Q07955 MDC1-203ENST00000417033 916 ntTSL 27.1□□□□□ -1.276e-6■□□□□ 11
SRSF1Q07955 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.336e-6■□□□□ 11
SRSF1Q07955 SCYL2-211ENST00000635101 3948 ntTSL 5 BASIC6.61□□□□□ -1.356e-6■□□□□ 11
SRSF1Q07955 LDLR-209ENST00000558528 456 ntTSL 24.86□□□□□ -1.636e-6■□□□□ 11
SRSF1Q07955 USP34-207ENST00000463046 6307 ntTSL 24.78□□□□□ -1.646e-6■□□□□ 11
SRSF1Q07955 USP34-202ENST00000411912 4309 ntTSL 53.3□□□□□ -1.886e-6■□□□□ 11
SRSF1Q07955 MDC1-208ENST00000494654 148 ntTSL 32.22□□□□□ -2.056e-6■□□□□ 11
SRSF1Q07955 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC7.32□□□□□ -1.244e-14■□□□□ 11
SRSF1Q07955 FUS-208ENST00000564766 791 ntTSL 23.98□□□□□ -1.777e-13■□□□□ 11
SRSF1Q07955 ENOSF1-207ENST00000579053 1313 ntTSL 512.19□□□□□ -0.462e-6■□□□□ 11
SRSF1Q07955 XIST-206ENST00000434839 2865 ntTSL 5 BASIC6.82□□□□□ -1.321e-6■□□□□ 11
SRSF1Q07955 NKTR-214ENST00000478488 698 ntTSL 315.37■□□□□ 0.051e-6■□□□□ 11
SRSF1Q07955 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.85□□□□□ -0.197e-8■□□□□ 11
SRSF1Q07955 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.27e-8■□□□□ 11
SRSF1Q07955 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC10.24□□□□□ -0.777e-8■□□□□ 11
SRSF1Q07955 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC9.86□□□□□ -0.837e-8■□□□□ 11
SRSF1Q07955 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.147e-8■□□□□ 11
SRSF1Q07955 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.143e-8■□□□□ 11
SRSF1Q07955 FKBP10-206ENST00000489591 2826 ntTSL 213.46□□□□□ -0.253e-8■□□□□ 11
SRSF1Q07955 FKBP10-203ENST00000455106 1965 ntTSL 211.45□□□□□ -0.583e-8■□□□□ 11
SRSF1Q07955 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.22■□□□□ 0.998e-9■□□□□ 11
SRSF1Q07955 AMDHD2-212ENST00000566706 940 ntTSL 520.61■□□□□ 0.898e-9■□□□□ 11
SRSF1Q07955 AMDHD2-214ENST00000567475 714 ntTSL 219.48■□□□□ 0.718e-9■□□□□ 11
SRSF1Q07955 SPAG16-206ENST00000420497 514 ntTSL 519.47■□□□□ 0.718e-9■□□□□ 11
SRSF1Q07955 SPAG16-208ENST00000440779 805 ntTSL 319.47■□□□□ 0.718e-9■□□□□ 11
SRSF1Q07955 AMDHD2-211ENST00000565963 844 ntTSL 519.4■□□□□ 0.78e-9■□□□□ 11
SRSF1Q07955 AMDHD2-217ENST00000569879 924 ntTSL 319.17■□□□□ 0.668e-9■□□□□ 11
SRSF1Q07955 AMDHD2-208ENST00000563556 490 ntTSL 419.17■□□□□ 0.668e-9■□□□□ 11
SRSF1Q07955 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.8■□□□□ 0.68e-9■□□□□ 11
SRSF1Q07955 AMDHD2-209ENST00000563633 1117 ntTSL 518.76■□□□□ 0.598e-9■□□□□ 11
SRSF1Q07955 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.498e-9■□□□□ 11
SRSF1Q07955 AMDHD2-215ENST00000568263 1482 ntTSL 217.09■□□□□ 0.338e-9■□□□□ 11
SRSF1Q07955 AMDHD2-216ENST00000569219 735 ntTSL 216.74■□□□□ 0.278e-9■□□□□ 11
SRSF1Q07955 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.198e-9■□□□□ 11
SRSF1Q07955 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.24■□□□□ 0.198e-9■□□□□ 11
SRSF1Q07955 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.34■□□□□ 0.058e-9■□□□□ 11
SRSF1Q07955 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.8□□□□□ -0.048e-9■□□□□ 11
SRSF1Q07955 SPAG16-203ENST00000406979 2352 ntTSL 1 (best)14□□□□□ -0.178e-9■□□□□ 11
SRSF1Q07955 CDCA7-205ENST00000435616 928 ntTSL 313.16□□□□□ -0.34e-7■□□□□ 11
SRSF1Q07955 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.318e-9■□□□□ 11
SRSF1Q07955 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC10.18□□□□□ -0.788e-9■□□□□ 11
SRSF1Q07955 COL27A1-204ENST00000477421 3991 ntTSL 28.61□□□□□ -1.031e-12■□□□□ 11
SRSF1Q07955 SPAG16-211ENST00000452556 4751 ntTSL 26.93□□□□□ -1.38e-9■□□□□ 11
SRSF1Q07955 CCAR1-205ENST00000483264 487 ntTSL 55.28□□□□□ -1.565e-8■□□□□ 11
SRSF1Q07955 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.26□□□□□ -0.452e-7■□□□□ 11
SRSF1Q07955 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.642e-7■□□□□ 11
SRSF1Q07955 COL27A1-207ENST00000494090 5329 ntTSL 1 (best)15.81■□□□□ 0.129e-8■□□□□ 11
SRSF1Q07955 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.099e-8■□□□□ 11
SRSF1Q07955 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.09■□□□□ 0.332e-8■□□□□ 11
SRSF1Q07955 GAPVD1-220ENST00000497580 3720 ntTSL 210.22□□□□□ -0.778e-8■□□□□ 11
SRSF1Q07955 GAPVD1-219ENST00000495955 5309 ntTSL 1 (best) BASIC7.52□□□□□ -1.218e-8■□□□□ 11
SRSF1Q07955 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC6.9□□□□□ -1.318e-8■□□□□ 11
SRSF1Q07955 GAPVD1-209ENST00000436712 2490 ntTSL 56.69□□□□□ -1.348e-8■□□□□ 11
SRSF1Q07955 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.458e-8■□□□□ 11
SRSF1Q07955 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.498e-8■□□□□ 11
SRSF1Q07955 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC5.7□□□□□ -1.58e-8■□□□□ 11
Retrieved 100 of 14,836 protein–RNA pairs in 24 ms