RNA–Protein interactions for RNA: ENST00000476670.2

GABBR1-210, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 4

Gene GABBR1, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-210ENST00000476670 NISCHQ9Y2I1 1504 aa52.51■■■■■ 6
GABBR1-210ENST00000476670 CCDC180Q9P1Z9 1646 aa46.97■■■■■ 5.11
GABBR1-210ENST00000476670 ABCC9O60706 1549 aa46.64■■■■■ 5.06
GABBR1-210ENST00000476670 RB1CC1Q8TDY2 1594 aa44.58■■■■■ 4.73
GABBR1-210ENST00000476670 NACADO15069 1562 aa44.38■■■■■ 4.69
GABBR1-210ENST00000476670 DCAF8L2P0C7V8 631 aa44.13■■■■■ 4.66
GABBR1-210ENST00000476670 MYO15BQ96JP2 1530 aa43.94■■■■■ 4.62
GABBR1-210ENST00000476670 ZCCHC6Q5VYS8 1495 aaKnown RBP43.58■■■■■ 4.57
GABBR1-210ENST00000476670 DNAJC5BQ9UF47 199 aa43.49■■■■■ 4.55
GABBR1-210ENST00000476670 PABPN1Q86U42 306 aaKnown RBP eCLIP43.47■■■■■ 4.55
GABBR1-210ENST00000476670 DCAF1Q9Y4B6 1507 aa43.46■■■■■ 4.55
GABBR1-210ENST00000476670 UNC13AQ9UPW8 1703 aa43.43■■■■■ 4.54
GABBR1-210ENST00000476670 BICRAQ9NZM4 1560 aa43.23■■■■■ 4.51
GABBR1-210ENST00000476670 SHROOM4Q9ULL8 1493 aa42.81■■■■■ 4.44
GABBR1-210ENST00000476670 SCRIBQ14160 1630 aa42.75■■■■■ 4.43
GABBR1-210ENST00000476670 EIF4G1Q04637 1599 aaKnown RBP42.16■■■■■ 4.34
GABBR1-210ENST00000476670 CC2D2AQ9P2K1 1620 aa42.15■■■■■ 4.34
GABBR1-210ENST00000476670 CECR2Q9BXF3 1484 aa42.02■■■■■ 4.32
GABBR1-210ENST00000476670 NCAPD3P42695 1498 aa40.99■■■■■ 4.15
GABBR1-210ENST00000476670 ATAD2BQ9ULI0 1458 aa40.87■■■■■ 4.13
GABBR1-210ENST00000476670 SMARCA4P51532 1647 aa40.85■■■■■ 4.13
GABBR1-210ENST00000476670 SMARCA2P51531 1590 aa40.78■■■■■ 4.12
GABBR1-210ENST00000476670 BAZ1AQ9NRL2 1556 aaPredicted RBP40.75■■■■■ 4.11
GABBR1-210ENST00000476670 HMGXB3Q12766 1538 aa40.68■■■■■ 4.1
GABBR1-210ENST00000476670 PEG3Q9GZU2 1588 aa40.52■■■■■ 4.08
GABBR1-210ENST00000476670 BAZ1BQ9UIG0 1483 aaKnown RBP40.47■■■■■ 4.07
GABBR1-210ENST00000476670 MROH2BQ7Z745 1585 aa40.43■■■■■ 4.06
GABBR1-210ENST00000476670 ERCC6Q03468 1493 aa40.27■■■■■ 4.04
GABBR1-210ENST00000476670 CUX2O14529 1486 aa40.15■■■■■ 4.02
GABBR1-210ENST00000476670 NESP48681 1621 aa40.13■■■■■ 4.02
GABBR1-210ENST00000476670 LAMC3Q9Y6N6 1575 aa39.98■■■■□ 3.99
GABBR1-210ENST00000476670 WIZO95785 1651 aa39.91■■■■□ 3.98
GABBR1-210ENST00000476670 DNAJC5Q9H3Z4 198 aa39.79■■■■□ 3.96
GABBR1-210ENST00000476670 PDS5BQ9NTI5 1447 aa39.77■■■■□ 3.96
GABBR1-210ENST00000476670 RSF1Q96T23 1441 aaPredicted RBP39.74■■■■□ 3.95
GABBR1-210ENST00000476670 CADPSQ9ULU8 1353 aa39.74■■■■□ 3.95
GABBR1-210ENST00000476670 THOC2Q8NI27 1593 aaKnown RBP39.68■■■■□ 3.94
GABBR1-210ENST00000476670 KIF21AQ7Z4S6 1674 aa39.58■■■■□ 3.93
GABBR1-210ENST00000476670 TOP2AP11388 1531 aaKnown RBP39.5■■■■□ 3.91
GABBR1-210ENST00000476670 MRC2Q9UBG0 1479 aa39.37■■■■□ 3.89
GABBR1-210ENST00000476670 CFTRP13569 1480 aa39.36■■■■□ 3.89
GABBR1-210ENST00000476670 CEP164Q9UPV0 1460 aa39.27■■■■□ 3.88
GABBR1-210ENST00000476670 WDR62O43379 1518 aa39.25■■■■□ 3.87
GABBR1-210ENST00000476670 FANCD2Q9BXW9 1451 aa39.25■■■■□ 3.87
GABBR1-210ENST00000476670 CCDC88BA6NC98 1476 aa39.05■■■■□ 3.84
GABBR1-210ENST00000476670 URB2Q14146 1524 aaKnown RBP38.89■■■■□ 3.82
GABBR1-210ENST00000476670 PRDM2Q13029 1718 aa38.86■■■■□ 3.81
GABBR1-210ENST00000476670 ABCC8Q09428 1581 aa38.56■■■■□ 3.76
GABBR1-210ENST00000476670 TOPBP1Q92547 1522 aa38.53■■■■□ 3.76
GABBR1-210ENST00000476670 IFT140Q96RY7 1462 aa38.51■■■■□ 3.76
GABBR1-210ENST00000476670 DNMBPQ6XZF7 1577 aa38.42■■■■□ 3.74
GABBR1-210ENST00000476670 OSCARQ8IYS5 282 aa38.38■■■■□ 3.73
GABBR1-210ENST00000476670 ZNF608Q9ULD9 1512 aaPredicted RBP38.34■■■■□ 3.73
GABBR1-210ENST00000476670 POLA1P09884 1462 aaPredicted RBP38.17■■■■□ 3.7
GABBR1-210ENST00000476670 TARBP1Q13395 1621 aaKnown RBP38.16■■■■□ 3.7
GABBR1-210ENST00000476670 SUPT5HO00267 1087 aaKnown RBP38.15■■■■□ 3.7
GABBR1-210ENST00000476670 EIF4G3O43432 1585 aaKnown RBP38.14■■■■□ 3.7
GABBR1-210ENST00000476670 TRIM41Q8WV44 630 aa38.07■■■■□ 3.68
GABBR1-210ENST00000476670 AQRO60306 1485 aaKnown RBP eCLIP38.05■■■■□ 3.68
GABBR1-210ENST00000476670 SOGA1O94964 1423 aa38.03■■■■□ 3.68
GABBR1-210ENST00000476670 RAD54L2Q9Y4B4 1467 aa37.99■■■■□ 3.67
GABBR1-210ENST00000476670 CUX1P39880 1505 aa37.96■■■■□ 3.67
GABBR1-210ENST00000476670 FGD5Q6ZNL6 1462 aa37.96■■■■□ 3.67
GABBR1-210ENST00000476670 TDRD9Q8NDG6 1382 aaKnown RBP37.88■■■■□ 3.65
GABBR1-210ENST00000476670 WDR97A6NE52 1622 aa37.87■■■■□ 3.65
GABBR1-210ENST00000476670 RIMBP3CA6NJZ7 1639 aa37.75■■■■□ 3.63
GABBR1-210ENST00000476670 RIMBP3BA6NNM3 1639 aa37.75■■■■□ 3.63
GABBR1-210ENST00000476670 RIMBP3Q9UFD9 1639 aa37.75■■■■□ 3.63
GABBR1-210ENST00000476670 CHD1O14646 1710 aa37.74■■■■□ 3.63
GABBR1-210ENST00000476670 FBLN2P98095 1184 aa37.73■■■■□ 3.63
GABBR1-210ENST00000476670 ARHGEF11O15085 1522 aa37.7■■■■□ 3.63
GABBR1-210ENST00000476670 SNAPC4Q5SXM2 1469 aa37.67■■■■□ 3.62
GABBR1-210ENST00000476670 GRIN2BQ13224 1484 aa37.66■■■■□ 3.62
GABBR1-210ENST00000476670 MAGI1Q96QZ7 1491 aaPredicted RBP37.64■■■■□ 3.62
GABBR1-210ENST00000476670 ABCA10Q8WWZ4 1543 aa37.59■■■■□ 3.61
GABBR1-210ENST00000476670 CHMP7Q8WUX9 453 aaPredicted RBP37.56■■■■□ 3.6
GABBR1-210ENST00000476670 GAPVD1Q14C86 1478 aa37.55■■■■□ 3.6
GABBR1-210ENST00000476670 WRNQ14191 1432 aaPredicted RBP eCLIP37.51■■■■□ 3.59
GABBR1-210ENST00000476670 SYNJ2O15056 1496 aa37.5■■■■□ 3.59
GABBR1-210ENST00000476670 TOP2BQ02880 1626 aa37.46■■■■□ 3.59
GABBR1-210ENST00000476670 ABCA5Q8WWZ7 1642 aa37.46■■■■□ 3.59
GABBR1-210ENST00000476670 BIVM-ERCC5R4GMW8 1640 aa37.44■■■■□ 3.58
GABBR1-210ENST00000476670 SYNJ1O43426 1573 aa37.43■■■■□ 3.58
GABBR1-210ENST00000476670 PBRM1Q86U86 1689 aa37.43■■■■□ 3.58
GABBR1-210ENST00000476670 CLASP1Q7Z460 1538 aa37.41■■■■□ 3.58
GABBR1-210ENST00000476670 CYB5RLQ6IPT4 315 aa37.41■■■■□ 3.58
GABBR1-210ENST00000476670 ARAP1Q96P48 1450 aa37.34■■■■□ 3.57
GABBR1-210ENST00000476670 GRIN2AQ12879 1464 aa37.16■■■■□ 3.54
GABBR1-210ENST00000476670 ADAMTS12P58397 1594 aa37.14■■■■□ 3.54
GABBR1-210ENST00000476670 ERICH3Q5RHP9 1530 aa37.13■■■■□ 3.53
GABBR1-210ENST00000476670 FHAD1B1AJZ9 1412 aa37.12■■■■□ 3.53
GABBR1-210ENST00000476670 NUP160Q12769 1436 aa37.05■■■■□ 3.52
GABBR1-210ENST00000476670 CEP170Q5SW79 1584 aa36.97■■■■□ 3.51
GABBR1-210ENST00000476670 TRHP20396 242 aaPredicted RBP36.88■■■■□ 3.49
GABBR1-210ENST00000476670 SHROOM2Q13796 1616 aa36.81■■■■□ 3.48
GABBR1-210ENST00000476670 ERCC6L2Q5T890 1561 aa36.78■■■■□ 3.48
GABBR1-210ENST00000476670 KIF27Q86VH2 1401 aa36.77■■■■□ 3.48
GABBR1-210ENST00000476670 IGF1RP08069 1367 aa36.73■■■■□ 3.47
GABBR1-210ENST00000476670 JPH4Q96JJ6 628 aa36.68■■■■□ 3.46
GABBR1-210ENST00000476670 PRG4Q92954 1404 aaPredicted RBP36.64■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms