Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 CYBRD1-202ENST00000375252 3540 ntTSL 1 (best) BASIC12.98□□□□□ -0.331e-7■■■□□ 17.6
MATR3P43243 CYBRD1-201ENST00000321348 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.551e-7■■■□□ 17.6
MATR3P43243 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.18□□□□□ -1.261e-7■■■□□ 17.6
MATR3P43243 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC7.18□□□□□ -1.262e-6■■■□□ 17.6
MATR3P43243 FOXN3-218ENST00000557718 398 ntTSL 56.42□□□□□ -1.387e-7■■■□□ 17.6
MATR3P43243 FOXN3-213ENST00000556916 467 ntTSL 33.98□□□□□ -1.777e-7■■■□□ 17.6
MATR3P43243 AC118553.2-205ENST00000638779 1983 ntTSL 523.94■■□□□ 1.422e-6■■■□□ 17.6
MATR3P43243 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.812e-6■■■□□ 17.6
MATR3P43243 AC118553.2-204ENST00000639040 2568 ntTSL 520■□□□□ 0.792e-6■■■□□ 17.6
MATR3P43243 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.792e-6■■■□□ 17.6
MATR3P43243 AC118553.2-201ENST00000638968 3175 ntTSL 518.38■□□□□ 0.532e-6■■■□□ 17.6
MATR3P43243 AC118553.2-208ENST00000640357 3488 ntTSL 513.91□□□□□ -0.182e-6■■■□□ 17.6
MATR3P43243 AC118553.2-206ENST00000639171 5352 ntTSL 512.82□□□□□ -0.362e-6■■■□□ 17.6
MATR3P43243 AC118553.2-207ENST00000640238 2901 ntTSL 57.03□□□□□ -1.282e-6■■■□□ 17.6
MATR3P43243 ACADSB-203ENST00000411816 512 ntTSL 32.39□□□□□ -2.038e-13■■■□□ 17.6
MATR3P43243 CABIN1-208ENST00000467937 593 ntTSL 320.35■□□□□ 0.852e-6■■■□□ 17.5
MATR3P43243 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.172e-6■■■□□ 17.5
MATR3P43243 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.212e-6■■■□□ 17.5
MATR3P43243 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.222e-6■■■□□ 17.5
MATR3P43243 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.332e-6■■■□□ 17.5
MATR3P43243 ABL1-202ENST00000372348 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.287e-7■■■□□ 17.5
MATR3P43243 ABL1-203ENST00000393293 532 ntTSL 55.66□□□□□ -1.57e-7■■■□□ 17.5
MATR3P43243 TM2D3-216ENST00000619579 3534 nt6.09□□□□□ -1.431e-6■■■□□ 17.5
MATR3P43243 SIK3-202ENST00000413553 3054 ntTSL 59.98□□□□□ -0.812e-6■■■□□ 17.5
MATR3P43243 GAA-205ENST00000572080 723 ntTSL 318.27■□□□□ 0.524e-6■■■□□ 17.5
MATR3P43243 GAA-202ENST00000390015 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.344e-6■■■□□ 17.5
MATR3P43243 GAA-201ENST00000302262 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.44e-6■■■□□ 17.5
MATR3P43243 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.658e-8■■■□□ 17.5
MATR3P43243 QSER1-203ENST00000527250 448 ntTSL 32.34□□□□□ -2.038e-8■■■□□ 17.5
MATR3P43243 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC24.18■■□□□ 1.469e-8■■■□□ 17.5
MATR3P43243 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.393e-6■■■□□ 17.5
MATR3P43243 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.51□□□□□ -1.213e-6■■■□□ 17.5
MATR3P43243 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.51□□□□□ -1.213e-6■■■□□ 17.5
MATR3P43243 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.49□□□□□ -1.692e-6■■■□□ 17.5
MATR3P43243 DLEU1-224ENST00000483444 332 ntTSL 1 (best)4.18□□□□□ -1.745e-7■■■□□ 17.5
MATR3P43243 RPS4Y1-202ENST00000430575 811 ntTSL 36.24□□□□□ -1.419e-7■■■□□ 17.5
MATR3P43243 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.719e-7■■■□□ 17.5
MATR3P43243 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.392e-6■■■□□ 17.5
MATR3P43243 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.163e-6■■■□□ 17.5
MATR3P43243 AC005381.1-203ENST00000591920 569 ntTSL 513.85□□□□□ -0.193e-22■■■□□ 17.5
MATR3P43243 AC005381.1-202ENST00000592716 574 ntTSL 57□□□□□ -1.293e-22■■■□□ 17.5
MATR3P43243 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.888e-7■■■□□ 17.5
MATR3P43243 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC8.75□□□□□ -1.018e-7■■■□□ 17.5
MATR3P43243 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.02□□□□□ -1.298e-7■■■□□ 17.5
MATR3P43243 SLC39A11-209ENST00000580557 794 ntTSL 315.31■□□□□ 0.046e-7■■■□□ 17.5
MATR3P43243 SLC39A11-214ENST00000583146 532 ntTSL 510.27□□□□□ -0.776e-7■■■□□ 17.5
MATR3P43243 CHN2-203ENST00000409350 539 ntTSL 415.07■□□□□ 04e-7■■■□□ 17.5
MATR3P43243 CHN2-213ENST00000439384 578 ntTSL 513.99□□□□□ -0.174e-7■■■□□ 17.5
MATR3P43243 CHN2-205ENST00000409964 547 ntTSL 411.48□□□□□ -0.574e-7■■■□□ 17.5
MATR3P43243 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.413e-6■■■□□ 17.5
MATR3P43243 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.413e-6■■■□□ 17.5
MATR3P43243 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.413e-6■■■□□ 17.5
MATR3P43243 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.538e-6■■■□□ 17.4
MATR3P43243 CCDC122-201ENST00000444614 2009 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.478e-6■■■□□ 17.4
MATR3P43243 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.648e-6■■■□□ 17.4
MATR3P43243 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.828e-6■■■□□ 17.4
MATR3P43243 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.058e-6■■■□□ 17.4
MATR3P43243 NEDD4-206ENST00000507063 457 ntTSL 57.05□□□□□ -1.288e-6■■■□□ 17.4
MATR3P43243 NEDD4-203ENST00000502612 652 ntTSL 36.04□□□□□ -1.448e-6■■■□□ 17.4
MATR3P43243 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.59□□□□□ -1.678e-6■■■□□ 17.4
MATR3P43243 NEDD4-209ENST00000508871 5707 ntTSL 1 (best)4.58□□□□□ -1.688e-6■■■□□ 17.4
MATR3P43243 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.52□□□□□ -1.858e-6■■■□□ 17.4
MATR3P43243 CCDC122-202ENST00000470137 704 ntTSL 52.95□□□□□ -1.948e-6■■■□□ 17.4
MATR3P43243 NEDD4-204ENST00000503468 6339 ntTSL 1 (best)2.91□□□□□ -1.948e-6■■■□□ 17.4
MATR3P43243 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.41□□□□□ -2.028e-6■■■□□ 17.4
MATR3P43243 NEDD4-211ENST00000514893 577 ntTSL 42.34□□□□□ -2.038e-6■■■□□ 17.4
MATR3P43243 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC9.21□□□□□ -0.944e-7■■■□□ 17.4
MATR3P43243 CHDH-203ENST00000481668 631 ntTSL 221.71■■□□□ 1.074e-7■■■□□ 17.4
MATR3P43243 CHDH-202ENST00000467802 565 ntTSL 221.45■■□□□ 1.024e-7■■■□□ 17.4
MATR3P43243 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.464e-7■■■□□ 17.4
MATR3P43243 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC15.91■□□□□ 0.146e-8■■■□□ 17.4
MATR3P43243 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC14.35□□□□□ -0.116e-8■■■□□ 17.4
MATR3P43243 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.686e-8■■■□□ 17.4
MATR3P43243 UQCC1-213ENST00000453855 1035 ntTSL 415.45■□□□□ 0.062e-6■■■□□ 17.4
MATR3P43243 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC15.44■□□□□ 0.062e-6■■■□□ 17.4
MATR3P43243 UQCC1-210ENST00000424405 758 ntTSL 513.98□□□□□ -0.172e-6■■■□□ 17.4
MATR3P43243 UQCC1-214ENST00000457259 1987 ntTSL 1 (best)13.52□□□□□ -0.252e-6■■■□□ 17.4
MATR3P43243 UQCC1-206ENST00000374394 2329 ntTSL 213.29□□□□□ -0.282e-6■■■□□ 17.4
MATR3P43243 UQCC1-203ENST00000374380 2133 ntTSL 2 BASIC12.99□□□□□ -0.332e-6■■■□□ 17.4
MATR3P43243 UQCC1-201ENST00000349714 2188 ntTSL 5 BASIC12.97□□□□□ -0.332e-6■■■□□ 17.4
MATR3P43243 UQCC1-202ENST00000359226 2036 ntTSL 4 BASIC12.26□□□□□ -0.452e-6■■■□□ 17.4
MATR3P43243 UQCC1-212ENST00000443429 692 ntTSL 511.74□□□□□ -0.532e-6■■■□□ 17.4
MATR3P43243 UQCC1-205ENST00000374385 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.542e-6■■■□□ 17.4
MATR3P43243 UQCC1-211ENST00000438533 736 ntTSL 39.16□□□□□ -0.942e-6■■■□□ 17.4
MATR3P43243 C3-215ENST00000601008 303 ntTSL 56.82□□□□□ -1.322e-6■■■□□ 17.4
MATR3P43243 RERE-203ENST00000400907 2973 ntTSL 5 BASIC8.77□□□□□ -1.011e-6■■■□□ 17.4
MATR3P43243 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.421e-8■■■□□ 17.4
MATR3P43243 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.11■■□□□ 1.291e-8■■■□□ 17.4
MATR3P43243 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.06■■□□□ 1.281e-8■■■□□ 17.4
MATR3P43243 LSM1-205ENST00000523511 700 ntTSL 317.86■□□□□ 0.454e-6■■■□□ 17.4
MATR3P43243 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.454e-6■■■□□ 17.4
MATR3P43243 LSM1-204ENST00000522515 1568 ntTSL 317.79■□□□□ 0.444e-6■■■□□ 17.4
MATR3P43243 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.383e-9■■■□□ 17.4
MATR3P43243 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.73■□□□□ 0.274e-6■■■□□ 17.4
MATR3P43243 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.253e-7■■■□□ 17.4
MATR3P43243 MRPL37-203ENST00000398219 868 ntTSL 314.69□□□□□ -0.061e-8■■■□□ 17.4
MATR3P43243 ZNF330-208ENST00000515453 558 ntTSL 414.64□□□□□ -0.071e-8■■■□□ 17.4
MATR3P43243 TANK-214ENST00000456358 564 ntTSL 514.46□□□□□ -0.093e-9■■■□□ 17.4
MATR3P43243 SMAD5-209ENST00000514777 588 ntTSL 314.16□□□□□ -0.141e-8■■■□□ 17.4
MATR3P43243 ZNF330-203ENST00000506302 1180 ntTSL 213.53□□□□□ -0.241e-8■■■□□ 17.4
Retrieved 100 of 16,209 protein–RNA pairs in 101.7 ms