RNA–Protein interactions for RNA: ENST00000507063.1

NEDD4-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4, Length 457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-206ENST00000507063 AEBP2Q6ZN18 517 aaPredicted RBP23.78■■□□□ 1.4
NEDD4-206ENST00000507063 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
NEDD4-206ENST00000507063 SENP3Q9H4L4 574 aaPredicted RBP20.53■□□□□ 0.88
NEDD4-206ENST00000507063 PHF23Q9BUL5 403 aaPredicted RBP20.16■□□□□ 0.82
NEDD4-206ENST00000507063 FOXD1Q16676 465 aa19.02■□□□□ 0.64
NEDD4-206ENST00000507063 MSH5O43196 834 aa18.04■□□□□ 0.48
NEDD4-206ENST00000507063 PLPPR3Q6T4P5 718 aa18.02■□□□□ 0.48
NEDD4-206ENST00000507063 PIAS4Q8N2W9 510 aaPredicted RBP17.81■□□□□ 0.44
NEDD4-206ENST00000507063 POTEDQ86YR6 584 aa17.76■□□□□ 0.43
NEDD4-206ENST00000507063 PPP6R1Q9UPN7 881 aa17.57■□□□□ 0.4
NEDD4-206ENST00000507063 ADRA2BP18089 450 aa17.55■□□□□ 0.4
NEDD4-206ENST00000507063 NISCHQ9Y2I1 1504 aa16.32■□□□□ 0.2
NEDD4-206ENST00000507063 SCAF1Q9H7N4 1312 aaKnown RBP16.31■□□□□ 0.2
NEDD4-206ENST00000507063 DMRT2Q9Y5R5 561 aa16.19■□□□□ 0.18
NEDD4-206ENST00000507063 MAPK8IP2Q13387 824 aaPredicted RBP16.14■□□□□ 0.17
NEDD4-206ENST00000507063 PPP4R3CPQ6ZMV5 832 aa15.7■□□□□ 0.1
NEDD4-206ENST00000507063 DCAF8L1A6NGE4 600 aa15.6■□□□□ 0.09
NEDD4-206ENST00000507063 CACNB1Q02641 598 aaPredicted RBP15.56■□□□□ 0.08
NEDD4-206ENST00000507063 HOXD11P31277 338 aaPredicted RBP15.52■□□□□ 0.08
NEDD4-206ENST00000507063 CNKSR2Q8WXI2 1034 aa15.51■□□□□ 0.07
NEDD4-206ENST00000507063 RNF216Q9NWF9 866 aaPredicted RBP15.41■□□□□ 0.06
NEDD4-206ENST00000507063 RNF39Q9H2S5 420 aa15.27■□□□□ 0.04
NEDD4-206ENST00000507063 NCBP3Q53F19 620 aaKnown RBP15.2■□□□□ 0.02
NEDD4-206ENST00000507063 C1QBPQ07021 282 aaKnown RBP15.13■□□□□ 0.01
NEDD4-206ENST00000507063 DNAJC5BQ9UF47 199 aa15.12■□□□□ 0.01
NEDD4-206ENST00000507063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.87□□□□□ -0.03
NEDD4-206ENST00000507063 NPM3O75607 178 aaKnown RBP14.79□□□□□ -0.04
NEDD4-206ENST00000507063 ABCC9O60706 1549 aa14.77□□□□□ -0.04
NEDD4-206ENST00000507063 CCDC180Q9P1Z9 1646 aa14.56□□□□□ -0.08
NEDD4-206ENST00000507063 U3KPZ7 1027 aaPredicted RBP14.42□□□□□ -0.1
NEDD4-206ENST00000507063 KCNA4P22459 653 aa14.38□□□□□ -0.11
NEDD4-206ENST00000507063 CAPN15O75808 1086 aa14.35□□□□□ -0.11
NEDD4-206ENST00000507063 APLP2Q06481 763 aa14.28□□□□□ -0.12
NEDD4-206ENST00000507063 SPINK5Q9NQ38 1064 aaPredicted RBP14.24□□□□□ -0.13
NEDD4-206ENST00000507063 DSG3P32926 999 aa14.22□□□□□ -0.13
NEDD4-206ENST00000507063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.17□□□□□ -0.14
NEDD4-206ENST00000507063 HNRNPUL2Q1KMD3 747 aaKnown RBP14.17□□□□□ -0.14
NEDD4-206ENST00000507063 SLC4A2P04920 1241 aa14.11□□□□□ -0.15
NEDD4-206ENST00000507063 ZNF219Q9P2Y4 722 aaPredicted RBP14.11□□□□□ -0.15
NEDD4-206ENST00000507063 TRHP20396 242 aaPredicted RBP14.05□□□□□ -0.16
NEDD4-206ENST00000507063 SAMD1Q6SPF0 538 aaPredicted RBP14.02□□□□□ -0.17
NEDD4-206ENST00000507063 POTEHQ6S545 545 aa13.93□□□□□ -0.18
NEDD4-206ENST00000507063 RB1CC1Q8TDY2 1594 aa13.92□□□□□ -0.18
NEDD4-206ENST00000507063 ABCB7O75027 752 aa13.92□□□□□ -0.18
NEDD4-206ENST00000507063 DCAF8L2P0C7V8 631 aa13.92□□□□□ -0.18
NEDD4-206ENST00000507063 NACADO15069 1562 aa13.81□□□□□ -0.2
NEDD4-206ENST00000507063 PABPN1Q86U42 306 aaKnown RBP eCLIP13.81□□□□□ -0.2
NEDD4-206ENST00000507063 MYCNP04198 464 aaPredicted RBP13.79□□□□□ -0.2
NEDD4-206ENST00000507063 RBM42Q9BTD8 480 aaKnown RBP13.76□□□□□ -0.21
NEDD4-206ENST00000507063 UNC13AQ9UPW8 1703 aa13.67□□□□□ -0.22
NEDD4-206ENST00000507063 POLA2Q14181 598 aa13.61□□□□□ -0.23
NEDD4-206ENST00000507063 BICRAQ9NZM4 1560 aa13.61□□□□□ -0.23
NEDD4-206ENST00000507063 SLC4A1APQ9BWU0 796 aaKnown RBP13.58□□□□□ -0.24
NEDD4-206ENST00000507063 MYO15BQ96JP2 1530 aa13.56□□□□□ -0.24
NEDD4-206ENST00000507063 FOXD4L1Q9NU39 408 aa13.52□□□□□ -0.25
NEDD4-206ENST00000507063 ZCCHC6Q5VYS8 1495 aaKnown RBP13.49□□□□□ -0.25
NEDD4-206ENST00000507063 ZBTB12Q9Y330 459 aaPredicted RBP13.48□□□□□ -0.25
NEDD4-206ENST00000507063 CHRDL2Q6WN34 429 aa13.4□□□□□ -0.26
NEDD4-206ENST00000507063 DCAF1Q9Y4B6 1507 aa13.39□□□□□ -0.27
NEDD4-206ENST00000507063 SCRIBQ14160 1630 aa13.39□□□□□ -0.27
NEDD4-206ENST00000507063 AKT1S1Q96B36 256 aa13.33□□□□□ -0.28
NEDD4-206ENST00000507063 ZBTB22O15209 634 aa13.3□□□□□ -0.28
NEDD4-206ENST00000507063 CC2D2AQ9P2K1 1620 aa13.3□□□□□ -0.28
NEDD4-206ENST00000507063 ATF5Q9Y2D1 282 aaPredicted RBP13.29□□□□□ -0.28
NEDD4-206ENST00000507063 CECR2Q9BXF3 1484 aa13.27□□□□□ -0.29
NEDD4-206ENST00000507063 EIF4G1Q04637 1599 aaKnown RBP13.24□□□□□ -0.29
NEDD4-206ENST00000507063 SHROOM4Q9ULL8 1493 aa13.24□□□□□ -0.29
NEDD4-206ENST00000507063 ATXN8OSP0DMR3 200 aa13.18□□□□□ -0.3
NEDD4-206ENST00000507063 OSCARQ8IYS5 282 aa13.16□□□□□ -0.3
NEDD4-206ENST00000507063 REM2Q8IYK8 340 aaPredicted RBP13.14□□□□□ -0.31
NEDD4-206ENST00000507063 FBLN2P98095 1184 aa13.05□□□□□ -0.32
NEDD4-206ENST00000507063 PIP4P2Q8N4L2 257 aa13□□□□□ -0.33
NEDD4-206ENST00000507063 SP7Q8TDD2 431 aaPredicted RBP12.99□□□□□ -0.33
NEDD4-206ENST00000507063 EHMT2Q96KQ7 1210 aa12.98□□□□□ -0.33
NEDD4-206ENST00000507063 SPDYE2BA6NHP3 402 aa12.97□□□□□ -0.33
NEDD4-206ENST00000507063 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
NEDD4-206ENST00000507063 SPDYE6P0CI01 402 aa12.97□□□□□ -0.33
NEDD4-206ENST00000507063 SPDYE2Q495Y8 402 aa12.97□□□□□ -0.33
NEDD4-206ENST00000507063 CSRNP3Q8WYN3 585 aa12.97□□□□□ -0.33
NEDD4-206ENST00000507063 FXR2P51116 673 aaKnown RBP eCLIP12.91□□□□□ -0.34
NEDD4-206ENST00000507063 HAX1O00165 279 aa12.9□□□□□ -0.34
NEDD4-206ENST00000507063 SPDYE1Q8NFV5 336 aaPredicted RBP12.81□□□□□ -0.36
NEDD4-206ENST00000507063 NCAPD3P42695 1498 aa12.79□□□□□ -0.36
NEDD4-206ENST00000507063 DNAJC5Q9H3Z4 198 aa12.79□□□□□ -0.36
NEDD4-206ENST00000507063 ZNF692Q9BU19 519 aaPredicted RBP12.78□□□□□ -0.36
NEDD4-206ENST00000507063 ATAD2BQ9ULI0 1458 aa12.78□□□□□ -0.36
NEDD4-206ENST00000507063 CLEC11AQ9Y240 323 aa12.75□□□□□ -0.37
NEDD4-206ENST00000507063 SMARCA4P51532 1647 aa12.73□□□□□ -0.37
NEDD4-206ENST00000507063 NESP48681 1621 aa12.7□□□□□ -0.38
NEDD4-206ENST00000507063 SSUH2Q9Y2M2 353 aa12.7□□□□□ -0.38
NEDD4-206ENST00000507063 ERCC6Q03468 1493 aa12.7□□□□□ -0.38
NEDD4-206ENST00000507063 MKRN4PQ13434 485 aaPredicted RBP12.69□□□□□ -0.38
NEDD4-206ENST00000507063 PRKAR2AP13861 404 aaKnown RBP12.68□□□□□ -0.38
NEDD4-206ENST00000507063 SMARCA2P51531 1590 aa12.67□□□□□ -0.38
NEDD4-206ENST00000507063 HMGXB3Q12766 1538 aa12.65□□□□□ -0.38
NEDD4-206ENST00000507063 CUX2O14529 1486 aa12.64□□□□□ -0.39
NEDD4-206ENST00000507063 MROH2BQ7Z745 1585 aa12.62□□□□□ -0.39
NEDD4-206ENST00000507063 BAZ1AQ9NRL2 1556 aaPredicted RBP12.62□□□□□ -0.39
NEDD4-206ENST00000507063 BAZ1BQ9UIG0 1483 aaKnown RBP12.62□□□□□ -0.39
NEDD4-206ENST00000507063 PEG3Q9GZU2 1588 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms