RNA–Protein interactions for RNA: ENST00000619579.1

TM2D3-216, Transcript of TM2 domain containing 3, humanhuman

Gene TM2D3, Length 3,534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-216ENST00000619579 NISCHQ9Y2I1 1504 aa12.31□□□□□ -0.44
TM2D3-216ENST00000619579 CCDC180Q9P1Z9 1646 aa10.59□□□□□ -0.71
TM2D3-216ENST00000619579 ZCCHC6Q5VYS8 1495 aaKnown RBP10.41□□□□□ -0.74
TM2D3-216ENST00000619579 SHROOM4Q9ULL8 1493 aa10.28□□□□□ -0.76
TM2D3-216ENST00000619579 DCAF1Q9Y4B6 1507 aa10.12□□□□□ -0.79
TM2D3-216ENST00000619579 DCAF8L2P0C7V8 631 aa9.97□□□□□ -0.81
TM2D3-216ENST00000619579 SUPT5HO00267 1087 aaKnown RBP9.93□□□□□ -0.82
TM2D3-216ENST00000619579 MYO15BQ96JP2 1530 aa9.87□□□□□ -0.83
TM2D3-216ENST00000619579 SCRIBQ14160 1630 aa9.85□□□□□ -0.83
TM2D3-216ENST00000619579 ABCC9O60706 1549 aa9.82□□□□□ -0.84
TM2D3-216ENST00000619579 NACADO15069 1562 aa9.74□□□□□ -0.85
TM2D3-216ENST00000619579 CHIC1Q5VXU3 224 aa9.69□□□□□ -0.86
TM2D3-216ENST00000619579 RSF1Q96T23 1441 aaPredicted RBP9.67□□□□□ -0.86
TM2D3-216ENST00000619579 UNC13AQ9UPW8 1703 aa9.67□□□□□ -0.86
TM2D3-216ENST00000619579 CECR2Q9BXF3 1484 aa9.63□□□□□ -0.87
TM2D3-216ENST00000619579 RB1CC1Q8TDY2 1594 aa9.62□□□□□ -0.87
TM2D3-216ENST00000619579 MROH2BQ7Z745 1585 aa9.59□□□□□ -0.87
TM2D3-216ENST00000619579 WIZO95785 1651 aa9.56□□□□□ -0.88
TM2D3-216ENST00000619579 BICRAQ9NZM4 1560 aa9.48□□□□□ -0.89
TM2D3-216ENST00000619579 EIF4G1Q04637 1599 aaKnown RBP9.47□□□□□ -0.89
TM2D3-216ENST00000619579 BAZ1AQ9NRL2 1556 aaPredicted RBP9.47□□□□□ -0.89
TM2D3-216ENST00000619579 SMARCA4P51532 1647 aa9.44□□□□□ -0.9
TM2D3-216ENST00000619579 LOC105371045A0A1W2PR82 267 aa9.39□□□□□ -0.91
TM2D3-216ENST00000619579 TOP2AP11388 1531 aaKnown RBP9.36□□□□□ -0.91
TM2D3-216ENST00000619579 SMARCA2P51531 1590 aa9.34□□□□□ -0.91
TM2D3-216ENST00000619579 CCDC88BA6NC98 1476 aa9.3□□□□□ -0.92
TM2D3-216ENST00000619579 PABPN1Q86U42 306 aaKnown RBP eCLIP9.3□□□□□ -0.92
TM2D3-216ENST00000619579 PEG3Q9GZU2 1588 aa9.29□□□□□ -0.92
TM2D3-216ENST00000619579 ABCC8Q09428 1581 aa9.26□□□□□ -0.93
TM2D3-216ENST00000619579 TRIM41Q8WV44 630 aa9.24□□□□□ -0.93
TM2D3-216ENST00000619579 ATAD2BQ9ULI0 1458 aa9.18□□□□□ -0.94
TM2D3-216ENST00000619579 EHMT2Q96KQ7 1210 aa9.18□□□□□ -0.94
TM2D3-216ENST00000619579 FAM9AQ8IZU1 332 aaPredicted RBP9.17□□□□□ -0.94
TM2D3-216ENST00000619579 PCGF6Q9BYE7 350 aa9.16□□□□□ -0.94
TM2D3-216ENST00000619579 RUSC2Q8N2Y8 1516 aa9.12□□□□□ -0.95
TM2D3-216ENST00000619579 SYNJ1O43426 1573 aa9.12□□□□□ -0.95
TM2D3-216ENST00000619579 HRCP23327 699 aa9.11□□□□□ -0.95
TM2D3-216ENST00000619579 SOGA1O94964 1423 aa9.11□□□□□ -0.95
TM2D3-216ENST00000619579 BAZ1BQ9UIG0 1483 aaKnown RBP9.09□□□□□ -0.95
TM2D3-216ENST00000619579 AEBP2Q6ZN18 517 aaPredicted RBP9.09□□□□□ -0.95
TM2D3-216ENST00000619579 HMGXB3Q12766 1538 aa9.03□□□□□ -0.96
TM2D3-216ENST00000619579 WRNQ14191 1432 aaPredicted RBP eCLIP9.02□□□□□ -0.97
TM2D3-216ENST00000619579 NCAPD3P42695 1498 aa9.01□□□□□ -0.97
TM2D3-216ENST00000619579 TRIM26Q12899 539 aaPredicted RBP9.01□□□□□ -0.97
TM2D3-216ENST00000619579 PPARGC1BQ86YN6 1023 aaKnown RBP9.01□□□□□ -0.97
TM2D3-216ENST00000619579 BIVM-ERCC5R4GMW8 1640 aa9□□□□□ -0.97
TM2D3-216ENST00000619579 TOP2BQ02880 1626 aa8.99□□□□□ -0.97
TM2D3-216ENST00000619579 PRDM2Q13029 1718 aa8.96□□□□□ -0.97
TM2D3-216ENST00000619579 CEP162Q5TB80 1403 aa8.95□□□□□ -0.98
TM2D3-216ENST00000619579 KIF21BO75037 1637 aa8.95□□□□□ -0.98
TM2D3-216ENST00000619579 CUX1P39880 1505 aa8.94□□□□□ -0.98
TM2D3-216ENST00000619579 EEA1Q15075 1411 aa8.93□□□□□ -0.98
TM2D3-216ENST00000619579 TNIKQ9UKE5 1360 aa8.92□□□□□ -0.98
TM2D3-216ENST00000619579 CSRNP3Q8WYN3 585 aa8.92□□□□□ -0.98
TM2D3-216ENST00000619579 CFTRP13569 1480 aa8.91□□□□□ -0.98
TM2D3-216ENST00000619579 CC2D2AQ9P2K1 1620 aa8.91□□□□□ -0.98
TM2D3-216ENST00000619579 GOLGA3Q08378 1498 aa8.9□□□□□ -0.98
TM2D3-216ENST00000619579 RAPGEF2Q9Y4G8 1499 aa8.89□□□□□ -0.99
TM2D3-216ENST00000619579 CEP164Q9UPV0 1460 aa8.86□□□□□ -0.99
TM2D3-216ENST00000619579 PRXQ9BXM0 1461 aa8.83□□□□□ -1
TM2D3-216ENST00000619579 ERICH3Q5RHP9 1530 aa8.8□□□□□ -1
TM2D3-216ENST00000619579 SLC24A1O60721 1099 aa8.79□□□□□ -1
TM2D3-216ENST00000619579 UBTFP17480 764 aaKnown RBP8.79□□□□□ -1
TM2D3-216ENST00000619579 CADPSQ9ULU8 1353 aa8.78□□□□□ -1
TM2D3-216ENST00000619579 CLIP1P30622 1438 aa8.77□□□□□ -1
TM2D3-216ENST00000619579 ARAP1Q96P48 1450 aa8.77□□□□□ -1
TM2D3-216ENST00000619579 NESP48681 1621 aa8.77□□□□□ -1.01
TM2D3-216ENST00000619579 TTBK1Q5TCY1 1321 aaPredicted RBP8.76□□□□□ -1.01
TM2D3-216ENST00000619579 DNAJC5BQ9UF47 199 aa8.75□□□□□ -1.01
TM2D3-216ENST00000619579 VPS8Q8N3P4 1428 aa8.75□□□□□ -1.01
TM2D3-216ENST00000619579 FGD5Q6ZNL6 1462 aa8.75□□□□□ -1.01
TM2D3-216ENST00000619579 WDR97A6NE52 1622 aa8.72□□□□□ -1.01
TM2D3-216ENST00000619579 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.72□□□□□ -1.01
TM2D3-216ENST00000619579 FANCD2Q9BXW9 1451 aa8.72□□□□□ -1.01
TM2D3-216ENST00000619579 KIF27Q86VH2 1401 aa8.71□□□□□ -1.01
TM2D3-216ENST00000619579 IGF1RP08069 1367 aa8.7□□□□□ -1.02
TM2D3-216ENST00000619579 DNMBPQ6XZF7 1577 aa8.7□□□□□ -1.02
TM2D3-216ENST00000619579 CUX2O14529 1486 aa8.7□□□□□ -1.02
TM2D3-216ENST00000619579 ARHGAP35Q9NRY4 1499 aa8.7□□□□□ -1.02
TM2D3-216ENST00000619579 KIF21AQ7Z4S6 1674 aa8.68□□□□□ -1.02
TM2D3-216ENST00000619579 TOPBP1Q92547 1522 aa8.68□□□□□ -1.02
TM2D3-216ENST00000619579 RAD54L2Q9Y4B4 1467 aa8.68□□□□□ -1.02
TM2D3-216ENST00000619579 URB2Q14146 1524 aaKnown RBP8.67□□□□□ -1.02
TM2D3-216ENST00000619579 POLA1P09884 1462 aaPredicted RBP8.67□□□□□ -1.02
TM2D3-216ENST00000619579 RANGAP1P46060 587 aaPredicted RBP8.66□□□□□ -1.02
TM2D3-216ENST00000619579 LAMC3Q9Y6N6 1575 aa8.66□□□□□ -1.02
TM2D3-216ENST00000619579 ABCA10Q8WWZ4 1543 aa8.65□□□□□ -1.03
TM2D3-216ENST00000619579 ZEB1P37275 1124 aaPredicted RBP8.64□□□□□ -1.03
TM2D3-216ENST00000619579 KANK4Q5T7N3 995 aaPredicted RBP8.63□□□□□ -1.03
TM2D3-216ENST00000619579 ABCA5Q8WWZ7 1642 aa8.63□□□□□ -1.03
TM2D3-216ENST00000619579 CTTNBP2Q8WZ74 1663 aa8.61□□□□□ -1.03
TM2D3-216ENST00000619579 LRRIQ1Q96JM4 1722 aa8.61□□□□□ -1.03
TM2D3-216ENST00000619579 CARMIL1Q5VZK9 1371 aa8.6□□□□□ -1.03
TM2D3-216ENST00000619579 TARBP1Q13395 1621 aaKnown RBP8.6□□□□□ -1.03
TM2D3-216ENST00000619579 CUL7Q14999 1698 aa8.59□□□□□ -1.03
TM2D3-216ENST00000619579 PCF11O94913 1555 aaKnown RBP8.59□□□□□ -1.04
TM2D3-216ENST00000619579 CCER1Q8TC90 406 aaPredicted RBP8.58□□□□□ -1.04
TM2D3-216ENST00000619579 CFAP43Q8NDM7 1665 aa8.58□□□□□ -1.04
TM2D3-216ENST00000619579 TIAM1Q13009 1591 aa8.58□□□□□ -1.04
TM2D3-216ENST00000619579 RRBP1Q9P2E9 1410 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms