RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 AEBP2Q6ZN18 517 aaPredicted RBP29.11■■■□□ 2.25
NEDD4-203ENST00000502612 CHIC1Q5VXU3 224 aa28.79■■■□□ 2.2
NEDD4-203ENST00000502612 PHF23Q9BUL5 403 aaPredicted RBP25.46■■□□□ 1.67
NEDD4-203ENST00000502612 SENP3Q9H4L4 574 aaPredicted RBP24.45■■□□□ 1.5
NEDD4-203ENST00000502612 PLPPR3Q6T4P5 718 aa23.53■■□□□ 1.36
NEDD4-203ENST00000502612 FOXD1Q16676 465 aa22.75■■□□□ 1.23
NEDD4-203ENST00000502612 ADRA2BP18089 450 aa22.33■■□□□ 1.17
NEDD4-203ENST00000502612 PPP6R1Q9UPN7 881 aa22.33■■□□□ 1.17
NEDD4-203ENST00000502612 PIAS4Q8N2W9 510 aaPredicted RBP21.55■■□□□ 1.04
NEDD4-203ENST00000502612 KCNA4P22459 653 aa20.99■□□□□ 0.95
NEDD4-203ENST00000502612 PPP4R3CPQ6ZMV5 832 aa20.86■□□□□ 0.93
NEDD4-203ENST00000502612 MSH5O43196 834 aa20.66■□□□□ 0.9
NEDD4-203ENST00000502612 NCBP3Q53F19 620 aaKnown RBP20.33■□□□□ 0.85
NEDD4-203ENST00000502612 SCAF1Q9H7N4 1312 aaKnown RBP20.2■□□□□ 0.82
NEDD4-203ENST00000502612 NPM3O75607 178 aaKnown RBP20.18■□□□□ 0.82
NEDD4-203ENST00000502612 MAPK8IP2Q13387 824 aaPredicted RBP20.14■□□□□ 0.81
NEDD4-203ENST00000502612 CNKSR2Q8WXI2 1034 aa20.11■□□□□ 0.81
NEDD4-203ENST00000502612 EHMT2Q96KQ7 1210 aa20.09■□□□□ 0.81
NEDD4-203ENST00000502612 SLC4A1APQ9BWU0 796 aaKnown RBP20.01■□□□□ 0.79
NEDD4-203ENST00000502612 DMRT2Q9Y5R5 561 aa19.63■□□□□ 0.73
NEDD4-203ENST00000502612 RNF216Q9NWF9 866 aaPredicted RBP19.6■□□□□ 0.73
NEDD4-203ENST00000502612 CSRNP3Q8WYN3 585 aa19.59■□□□□ 0.73
NEDD4-203ENST00000502612 HOXD11P31277 338 aaPredicted RBP19.41■□□□□ 0.7
NEDD4-203ENST00000502612 ZBTB22O15209 634 aa19.38■□□□□ 0.69
NEDD4-203ENST00000502612 DNAJC5BQ9UF47 199 aa19.37■□□□□ 0.69
NEDD4-203ENST00000502612 FOXD4L1Q9NU39 408 aa19.09■□□□□ 0.65
NEDD4-203ENST00000502612 SLC4A2P04920 1241 aa18.97■□□□□ 0.63
NEDD4-203ENST00000502612 DCAF8L1A6NGE4 600 aa18.82■□□□□ 0.6
NEDD4-203ENST00000502612 MYCNP04198 464 aaPredicted RBP18.56■□□□□ 0.56
NEDD4-203ENST00000502612 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.5■□□□□ 0.55
NEDD4-203ENST00000502612 U3KPZ7 1027 aaPredicted RBP18.32■□□□□ 0.52
NEDD4-203ENST00000502612 ATXN8OSP0DMR3 200 aa18.29■□□□□ 0.52
NEDD4-203ENST00000502612 ATF5Q9Y2D1 282 aaPredicted RBP18.19■□□□□ 0.5
NEDD4-203ENST00000502612 POTEDQ86YR6 584 aa18.09■□□□□ 0.49
NEDD4-203ENST00000502612 SAMD1Q6SPF0 538 aaPredicted RBP18.07■□□□□ 0.48
NEDD4-203ENST00000502612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.06■□□□□ 0.48
NEDD4-203ENST00000502612 HNRNPUL2Q1KMD3 747 aaKnown RBP18.06■□□□□ 0.48
NEDD4-203ENST00000502612 RNF39Q9H2S5 420 aa17.82■□□□□ 0.44
NEDD4-203ENST00000502612 APLP2Q06481 763 aa17.73■□□□□ 0.43
NEDD4-203ENST00000502612 ZNF219Q9P2Y4 722 aaPredicted RBP17.73■□□□□ 0.43
NEDD4-203ENST00000502612 SPINK5Q9NQ38 1064 aaPredicted RBP17.71■□□□□ 0.43
NEDD4-203ENST00000502612 FKBP8Q14318 412 aa17.67■□□□□ 0.42
NEDD4-203ENST00000502612 TRHP20396 242 aaPredicted RBP17.6■□□□□ 0.41
NEDD4-203ENST00000502612 C1QBPQ07021 282 aaKnown RBP17.55■□□□□ 0.4
NEDD4-203ENST00000502612 CAPN15O75808 1086 aa17.54■□□□□ 0.4
NEDD4-203ENST00000502612 POLA2Q14181 598 aa17.4■□□□□ 0.38
NEDD4-203ENST00000502612 MKRN4PQ13434 485 aaPredicted RBP17.39■□□□□ 0.37
NEDD4-203ENST00000502612 ABCB7O75027 752 aa17.33■□□□□ 0.36
NEDD4-203ENST00000502612 FBLN2P98095 1184 aa17.2■□□□□ 0.34
NEDD4-203ENST00000502612 SPDYE4A6NLX3 237 aa17.15■□□□□ 0.34
NEDD4-203ENST00000502612 DSG3P32926 999 aa17.14■□□□□ 0.33
NEDD4-203ENST00000502612 ZBTB12Q9Y330 459 aaPredicted RBP17.01■□□□□ 0.31
NEDD4-203ENST00000502612 CACNB1Q02641 598 aaPredicted RBP17■□□□□ 0.31
NEDD4-203ENST00000502612 RTN4Q9NQC3 1192 aaKnown RBP16.97■□□□□ 0.31
NEDD4-203ENST00000502612 PROM2Q8N271 834 aa16.93■□□□□ 0.3
NEDD4-203ENST00000502612 AMER1Q5JTC6 1135 aaPredicted RBP16.85■□□□□ 0.29
NEDD4-203ENST00000502612 OSCARQ8IYS5 282 aa16.84■□□□□ 0.29
NEDD4-203ENST00000502612 FBXO3Q9UK99 471 aa16.75■□□□□ 0.27
NEDD4-203ENST00000502612 ZNF692Q9BU19 519 aaPredicted RBP16.7■□□□□ 0.26
NEDD4-203ENST00000502612 SPDYE2BA6NHP3 402 aa16.65■□□□□ 0.26
NEDD4-203ENST00000502612 SPDYE6P0CI01 402 aa16.65■□□□□ 0.26
NEDD4-203ENST00000502612 SPDYE2Q495Y8 402 aa16.65■□□□□ 0.26
NEDD4-203ENST00000502612 SSUH2Q9Y2M2 353 aa16.64■□□□□ 0.25
NEDD4-203ENST00000502612 VASPP50552 380 aaPredicted RBP16.63■□□□□ 0.25
NEDD4-203ENST00000502612 PABPN1Q86U42 306 aaKnown RBP eCLIP16.54■□□□□ 0.24
NEDD4-203ENST00000502612 IFNLR1Q8IU57 520 aaPredicted RBP16.49■□□□□ 0.23
NEDD4-203ENST00000502612 STAG3Q9UJ98 1225 aa16.31■□□□□ 0.2
NEDD4-203ENST00000502612 PLCD3Q8N3E9 789 aa16.22■□□□□ 0.19
NEDD4-203ENST00000502612 KLHL34Q8N239 644 aa16.21■□□□□ 0.19
NEDD4-203ENST00000502612 MIER1Q8N108 512 aa16.19■□□□□ 0.18
NEDD4-203ENST00000502612 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
NEDD4-203ENST00000502612 AKT1S1Q96B36 256 aa16.15■□□□□ 0.18
NEDD4-203ENST00000502612 SPOCK2Q92563 424 aa16.13■□□□□ 0.17
NEDD4-203ENST00000502612 PKD2Q13563 968 aa16.12■□□□□ 0.17
NEDD4-203ENST00000502612 REM2Q8IYK8 340 aaPredicted RBP16.06■□□□□ 0.16
NEDD4-203ENST00000502612 SPDYE1Q8NFV5 336 aaPredicted RBP16.05■□□□□ 0.16
NEDD4-203ENST00000502612 SLC24A1O60721 1099 aa16.04■□□□□ 0.16
NEDD4-203ENST00000502612 CLEC11AQ9Y240 323 aa16.03■□□□□ 0.16
NEDD4-203ENST00000502612 PLEKHG5O94827 1062 aa15.95■□□□□ 0.14
NEDD4-203ENST00000502612 DCAF8L2P0C7V8 631 aa15.94■□□□□ 0.14
NEDD4-203ENST00000502612 PITPNM1O00562 1244 aa15.91■□□□□ 0.14
NEDD4-203ENST00000502612 PRR29P0C7W0 189 aa15.9■□□□□ 0.14
NEDD4-203ENST00000502612 ECM2O94769 699 aaPredicted RBP15.89■□□□□ 0.13
NEDD4-203ENST00000502612 CREBZFQ9NS37 354 aa15.89■□□□□ 0.13
NEDD4-203ENST00000502612 ZBTB47Q9UFB7 747 aaPredicted RBP15.89■□□□□ 0.13
NEDD4-203ENST00000502612 CIZ1Q9ULV3 898 aaPredicted RBP15.84■□□□□ 0.13
NEDD4-203ENST00000502612 RGL2O15211 777 aa15.79■□□□□ 0.12
NEDD4-203ENST00000502612 MNX1P50219 401 aaPredicted RBP15.79■□□□□ 0.12
NEDD4-203ENST00000502612 NUBP1P53384 320 aa15.77■□□□□ 0.12
NEDD4-203ENST00000502612 NPM1P06748 294 aaKnown RBP eCLIP15.66■□□□□ 0.1
NEDD4-203ENST00000502612 CHADLQ6NUI6 762 aa15.66■□□□□ 0.1
NEDD4-203ENST00000502612 PLCB2Q00722 1185 aa15.64■□□□□ 0.09
NEDD4-203ENST00000502612 DCAF8Q5TAQ9 597 aa15.63■□□□□ 0.09
NEDD4-203ENST00000502612 RASEFQ8IZ41 740 aa15.63■□□□□ 0.09
NEDD4-203ENST00000502612 GSE1Q14687 1217 aa15.62■□□□□ 0.09
NEDD4-203ENST00000502612 RNF25Q96BH1 459 aaPredicted RBP15.58■□□□□ 0.08
NEDD4-203ENST00000502612 TRIM41Q8WV44 630 aa15.56■□□□□ 0.08
NEDD4-203ENST00000502612 FAM212AQ96EL1 285 aa15.56■□□□□ 0.08
NEDD4-203ENST00000502612 BBXQ8WY36 941 aaPredicted RBP15.49■□□□□ 0.07
NEDD4-203ENST00000502612 CHGAP10645 457 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms