RNA–Protein interactions for RNA: ENST00000484298.5

ALMS1-204, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-204ENST00000484298 PELP1Q8IZL8 1130 aaKnown RBP16.2■□□□□ 0.18
ALMS1-204ENST00000484298 MYT1Q01538 1121 aa15.69■□□□□ 0.1
ALMS1-204ENST00000484298 DCAF8L2P0C7V8 631 aa15.45■□□□□ 0.06
ALMS1-204ENST00000484298 CCER1Q8TC90 406 aaPredicted RBP15.35■□□□□ 0.05
ALMS1-204ENST00000484298 ERICH6Q7L0X2 663 aa15.32■□□□□ 0.04
ALMS1-204ENST00000484298 YTHDC1Q96MU7 727 aaKnown RBP14.99□□□□□ -0.01
ALMS1-204ENST00000484298 CENPBP07199 599 aaPredicted RBP14.92□□□□□ -0.02
ALMS1-204ENST00000484298 TTBK1Q5TCY1 1321 aaPredicted RBP14.86□□□□□ -0.03
ALMS1-204ENST00000484298 EHMT2Q96KQ7 1210 aa14.76□□□□□ -0.05
ALMS1-204ENST00000484298 NEFLP07196 543 aa14.63□□□□□ -0.07
ALMS1-204ENST00000484298 APLP2Q06481 763 aa14.55□□□□□ -0.08
ALMS1-204ENST00000484298 DAXXQ9UER7 740 aaPredicted RBP14.52□□□□□ -0.08
ALMS1-204ENST00000484298 ZEB1P37275 1124 aaPredicted RBP14.46□□□□□ -0.1
ALMS1-204ENST00000484298 SUPT5HO00267 1087 aaKnown RBP14.38□□□□□ -0.11
ALMS1-204ENST00000484298 FAM9AQ8IZU1 332 aaPredicted RBP14.32□□□□□ -0.12
ALMS1-204ENST00000484298 RTL5Q5HYW3 569 aaPredicted RBP14.25□□□□□ -0.13
ALMS1-204ENST00000484298 ZNF316A6NFI3 1004 aaPredicted RBP14.1□□□□□ -0.15
ALMS1-204ENST00000484298 PCGF6Q9BYE7 350 aa14.08□□□□□ -0.16
ALMS1-204ENST00000484298 SHROOM4Q9ULL8 1493 aa14.05□□□□□ -0.16
ALMS1-204ENST00000484298 GLIPR1L2Q4G1C9 344 aa14.02□□□□□ -0.17
ALMS1-204ENST00000484298 RANGAP1P46060 587 aaPredicted RBP13.99□□□□□ -0.17
ALMS1-204ENST00000484298 ATP1B4Q9UN42 357 aaPredicted RBP13.84□□□□□ -0.19
ALMS1-204ENST00000484298 CLSPNQ9HAW4 1339 aa13.77□□□□□ -0.2
ALMS1-204ENST00000484298 EIF5BO60841 1220 aaKnown RBP13.64□□□□□ -0.23
ALMS1-204ENST00000484298 ANP32BQ92688 251 aaKnown RBP13.62□□□□□ -0.23
ALMS1-204ENST00000484298 CHIC1Q5VXU3 224 aa13.61□□□□□ -0.23
ALMS1-204ENST00000484298 MYT1LQ9UL68 1186 aa13.58□□□□□ -0.24
ALMS1-204ENST00000484298 POLR3GLQ9BT43 218 aa13.58□□□□□ -0.24
ALMS1-204ENST00000484298 CNGB1Q14028 1251 aaPredicted RBP13.53□□□□□ -0.24
ALMS1-204ENST00000484298 ZBTB47Q9UFB7 747 aaPredicted RBP13.48□□□□□ -0.25
ALMS1-204ENST00000484298 CDK11AQ9UQ88 783 aaPredicted RBP13.48□□□□□ -0.25
ALMS1-204ENST00000484298 HRCP23327 699 aa13.46□□□□□ -0.25
ALMS1-204ENST00000484298 ANP32AP39687 249 aaKnown RBP13.44□□□□□ -0.26
ALMS1-204ENST00000484298 SLC4A1APQ9BWU0 796 aaKnown RBP13.43□□□□□ -0.26
ALMS1-204ENST00000484298 TNNT2P45379 298 aaPredicted RBP13.39□□□□□ -0.27
ALMS1-204ENST00000484298 TRIM26Q12899 539 aaPredicted RBP13.39□□□□□ -0.27
ALMS1-204ENST00000484298 UBTFP17480 764 aaKnown RBP13.36□□□□□ -0.27
ALMS1-204ENST00000484298 TRIM41Q8WV44 630 aa13.34□□□□□ -0.27
ALMS1-204ENST00000484298 PPARGC1BQ86YN6 1023 aaKnown RBP13.29□□□□□ -0.28
ALMS1-204ENST00000484298 DIEXFQ68CQ4 756 aaKnown RBP13.28□□□□□ -0.28
ALMS1-204ENST00000484298 BCL11AQ9H165 835 aa13.26□□□□□ -0.29
ALMS1-204ENST00000484298 HSP90AA1P07900 732 aaKnown RBP13.23□□□□□ -0.29
ALMS1-204ENST00000484298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.21□□□□□ -0.29
ALMS1-204ENST00000484298 HNRNPUL2Q1KMD3 747 aaKnown RBP13.21□□□□□ -0.29
ALMS1-204ENST00000484298 NEFMP07197 916 aa13.2□□□□□ -0.3
ALMS1-204ENST00000484298 ITGAEP38570 1179 aa13.2□□□□□ -0.3
ALMS1-204ENST00000484298 CDK11BP21127 795 aaKnown RBP13.2□□□□□ -0.3
ALMS1-204ENST00000484298 CANXP27824 592 aaKnown RBP13.18□□□□□ -0.3
ALMS1-204ENST00000484298 GTF3C3Q9Y5Q9 886 aa13.18□□□□□ -0.3
ALMS1-204ENST00000484298 UPF2Q9HAU5 1272 aaKnown RBP13.18□□□□□ -0.3
ALMS1-204ENST00000484298 TRIM44Q96DX7 344 aaPredicted RBP13.18□□□□□ -0.3
ALMS1-204ENST00000484298 BCANQ96GW7 911 aa13.12□□□□□ -0.31
ALMS1-204ENST00000484298 SLC24A1O60721 1099 aa13.12□□□□□ -0.31
ALMS1-204ENST00000484298 NCLP19338 710 aaKnown RBP13.08□□□□□ -0.32
ALMS1-204ENST00000484298 ANP32CO43423 234 aa13.07□□□□□ -0.32
ALMS1-204ENST00000484298 ANP32EQ9BTT0 268 aa13.04□□□□□ -0.32
ALMS1-204ENST00000484298 NPM2Q86SE8 214 aaKnown RBP13□□□□□ -0.33
ALMS1-204ENST00000484298 NISCHQ9Y2I1 1504 aa12.95□□□□□ -0.34
ALMS1-204ENST00000484298 ERICH6BQ5W0A0 696 aa12.93□□□□□ -0.34
ALMS1-204ENST00000484298 NBR1Q14596 966 aa12.91□□□□□ -0.34
ALMS1-204ENST00000484298 ACIN1Q9UKV3 1341 aaKnown RBP12.89□□□□□ -0.35
ALMS1-204ENST00000484298 GOLGA6L22H0YM25 854 aa12.85□□□□□ -0.35
ALMS1-204ENST00000484298 ARXQ96QS3 562 aa12.84□□□□□ -0.35
ALMS1-204ENST00000484298 DNTTIP2Q5QJE6 756 aaKnown RBP12.82□□□□□ -0.36
ALMS1-204ENST00000484298 ZNF326Q5BKZ1 582 aaKnown RBP12.81□□□□□ -0.36
ALMS1-204ENST00000484298 BECN1Q14457 450 aa12.81□□□□□ -0.36
ALMS1-204ENST00000484298 ZRSR1Q15695 479 aaKnown RBP12.8□□□□□ -0.36
ALMS1-204ENST00000484298 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.79□□□□□ -0.36
ALMS1-204ENST00000484298 PTMAP06454 111 aaKnown RBP12.78□□□□□ -0.36
ALMS1-204ENST00000484298 DDRGK1Q96HY6 314 aa12.78□□□□□ -0.36
ALMS1-204ENST00000484298 NAP1L5Q96NT1 182 aaPredicted RBP12.78□□□□□ -0.36
ALMS1-204ENST00000484298 GOLGA6L6A8MZA4 724 aa12.77□□□□□ -0.36
ALMS1-204ENST00000484298 CHAF1AQ13111 956 aaPredicted RBP12.76□□□□□ -0.37
ALMS1-204ENST00000484298 NRDCO43847 1150 aa12.74□□□□□ -0.37
ALMS1-204ENST00000484298 CALRP27797 417 aaKnown RBP12.73□□□□□ -0.37
ALMS1-204ENST00000484298 PLPPR3Q6T4P5 718 aa12.72□□□□□ -0.37
ALMS1-204ENST00000484298 FKBP8Q14318 412 aa12.69□□□□□ -0.38
ALMS1-204ENST00000484298 CCDC136Q96JN2 1154 aa12.69□□□□□ -0.38
ALMS1-204ENST00000484298 MYH16Q9H6N6 1097 aa12.68□□□□□ -0.38
ALMS1-204ENST00000484298 TNNT3P45378 269 aaPredicted RBP12.67□□□□□ -0.38
ALMS1-204ENST00000484298 L1TD1Q5T7N2 865 aaKnown RBP12.67□□□□□ -0.38
ALMS1-204ENST00000484298 TRIM52Q96A61 297 aa12.67□□□□□ -0.38
ALMS1-204ENST00000484298 FAM50AQ14320 339 aaKnown RBP12.66□□□□□ -0.38
ALMS1-204ENST00000484298 NEUROD1Q13562 356 aa12.64□□□□□ -0.39
ALMS1-204ENST00000484298 A0A0G2JS52 829 aa12.62□□□□□ -0.39
ALMS1-204ENST00000484298 AMER1Q5JTC6 1135 aaPredicted RBP12.62□□□□□ -0.39
ALMS1-204ENST00000484298 PTMSP20962 102 aa12.61□□□□□ -0.39
ALMS1-204ENST00000484298 PPM1GO15355 546 aaPredicted RBP12.6□□□□□ -0.39
ALMS1-204ENST00000484298 MSNP26038 577 aaKnown RBP12.57□□□□□ -0.4
ALMS1-204ENST00000484298 TULP1O00294 542 aaPredicted RBP12.56□□□□□ -0.4
ALMS1-204ENST00000484298 CASC1Q6TDU7 716 aa12.56□□□□□ -0.4
ALMS1-204ENST00000484298 USP35Q9P2H5 1018 aa12.54□□□□□ -0.4
ALMS1-204ENST00000484298 HNRNPUQ00839 825 aaKnown RBP eCLIP12.53□□□□□ -0.4
ALMS1-204ENST00000484298 SETQ01105 290 aaPredicted RBP12.51□□□□□ -0.41
ALMS1-204ENST00000484298 SCAF1Q9H7N4 1312 aaKnown RBP12.48□□□□□ -0.41
ALMS1-204ENST00000484298 GOLGA6L1Q8N7Z2 621 aa12.47□□□□□ -0.41
ALMS1-204ENST00000484298 NCBP3Q53F19 620 aaKnown RBP12.47□□□□□ -0.41
ALMS1-204ENST00000484298 PLEKHG5O94827 1062 aa12.46□□□□□ -0.41
ALMS1-204ENST00000484298 RTN4Q9NQC3 1192 aaKnown RBP12.46□□□□□ -0.41
ALMS1-204ENST00000484298 ARID3CA6NKF2 412 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms