RNA–Protein interactions for RNA: ENST00000264868.9

SEL1L3-201, Transcript of SEL1L family member 3, humanhuman

TSL 1 (best) BASIC

Gene SEL1L3, Length 4,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3-201ENST00000264868 NISCHQ9Y2I1 1504 aa17.49■□□□□ 0.39
SEL1L3-201ENST00000264868 DCAF8L2P0C7V8 631 aa15.36■□□□□ 0.05
SEL1L3-201ENST00000264868 CCDC180Q9P1Z9 1646 aa15.12■□□□□ 0.01
SEL1L3-201ENST00000264868 ABCC9O60706 1549 aa15.07■□□□□ 0
SEL1L3-201ENST00000264868 SHROOM4Q9ULL8 1493 aa14.65□□□□□ -0.06
SEL1L3-201ENST00000264868 ZCCHC6Q5VYS8 1495 aaKnown RBP14.56□□□□□ -0.08
SEL1L3-201ENST00000264868 PABPN1Q86U42 306 aaKnown RBP eCLIP14.35□□□□□ -0.11
SEL1L3-201ENST00000264868 RB1CC1Q8TDY2 1594 aa14.33□□□□□ -0.12
SEL1L3-201ENST00000264868 NACADO15069 1562 aa14.32□□□□□ -0.12
SEL1L3-201ENST00000264868 DCAF1Q9Y4B6 1507 aa14.24□□□□□ -0.13
SEL1L3-201ENST00000264868 SCRIBQ14160 1630 aa14.22□□□□□ -0.13
SEL1L3-201ENST00000264868 MYO15BQ96JP2 1530 aa14.13□□□□□ -0.15
SEL1L3-201ENST00000264868 SUPT5HO00267 1087 aaKnown RBP14.09□□□□□ -0.15
SEL1L3-201ENST00000264868 UNC13AQ9UPW8 1703 aa13.76□□□□□ -0.21
SEL1L3-201ENST00000264868 BICRAQ9NZM4 1560 aa13.74□□□□□ -0.21
SEL1L3-201ENST00000264868 CECR2Q9BXF3 1484 aa13.73□□□□□ -0.21
SEL1L3-201ENST00000264868 RSF1Q96T23 1441 aaPredicted RBP13.56□□□□□ -0.24
SEL1L3-201ENST00000264868 MROH2BQ7Z745 1585 aa13.55□□□□□ -0.24
SEL1L3-201ENST00000264868 BAZ1AQ9NRL2 1556 aaPredicted RBP13.54□□□□□ -0.24
SEL1L3-201ENST00000264868 DNAJC5BQ9UF47 199 aa13.53□□□□□ -0.24
SEL1L3-201ENST00000264868 EIF4G1Q04637 1599 aaKnown RBP13.49□□□□□ -0.25
SEL1L3-201ENST00000264868 SMARCA4P51532 1647 aa13.45□□□□□ -0.26
SEL1L3-201ENST00000264868 BAZ1BQ9UIG0 1483 aaKnown RBP13.41□□□□□ -0.26
SEL1L3-201ENST00000264868 ATAD2BQ9ULI0 1458 aa13.4□□□□□ -0.26
SEL1L3-201ENST00000264868 WIZO95785 1651 aa13.4□□□□□ -0.26
SEL1L3-201ENST00000264868 CC2D2AQ9P2K1 1620 aa13.38□□□□□ -0.27
SEL1L3-201ENST00000264868 SMARCA2P51531 1590 aa13.35□□□□□ -0.27
SEL1L3-201ENST00000264868 NCAPD3P42695 1498 aa13.27□□□□□ -0.29
SEL1L3-201ENST00000264868 TOP2AP11388 1531 aaKnown RBP13.2□□□□□ -0.3
SEL1L3-201ENST00000264868 CCDC88BA6NC98 1476 aa13.19□□□□□ -0.3
SEL1L3-201ENST00000264868 TRIM41Q8WV44 630 aa13.16□□□□□ -0.3
SEL1L3-201ENST00000264868 HMGXB3Q12766 1538 aa13.12□□□□□ -0.31
SEL1L3-201ENST00000264868 PEG3Q9GZU2 1588 aa13.11□□□□□ -0.31
SEL1L3-201ENST00000264868 FAM9AQ8IZU1 332 aaPredicted RBP13.1□□□□□ -0.31
SEL1L3-201ENST00000264868 EHMT2Q96KQ7 1210 aa13.1□□□□□ -0.31
SEL1L3-201ENST00000264868 CADPSQ9ULU8 1353 aa13.07□□□□□ -0.32
SEL1L3-201ENST00000264868 CHIC1Q5VXU3 224 aa13.06□□□□□ -0.32
SEL1L3-201ENST00000264868 NESP48681 1621 aa13.04□□□□□ -0.32
SEL1L3-201ENST00000264868 ERCC6Q03468 1493 aa13.02□□□□□ -0.32
SEL1L3-201ENST00000264868 PDS5BQ9NTI5 1447 aa12.97□□□□□ -0.33
SEL1L3-201ENST00000264868 CFTRP13569 1480 aa12.92□□□□□ -0.34
SEL1L3-201ENST00000264868 FANCD2Q9BXW9 1451 aa12.91□□□□□ -0.34
SEL1L3-201ENST00000264868 WRNQ14191 1432 aaPredicted RBP eCLIP12.88□□□□□ -0.35
SEL1L3-201ENST00000264868 ABCC8Q09428 1581 aa12.88□□□□□ -0.35
SEL1L3-201ENST00000264868 CEP164Q9UPV0 1460 aa12.86□□□□□ -0.35
SEL1L3-201ENST00000264868 LAMC3Q9Y6N6 1575 aa12.82□□□□□ -0.36
SEL1L3-201ENST00000264868 RANGAP1P46060 587 aaPredicted RBP12.81□□□□□ -0.36
SEL1L3-201ENST00000264868 FBLN2P98095 1184 aa12.78□□□□□ -0.36
SEL1L3-201ENST00000264868 UBTFP17480 764 aaKnown RBP12.75□□□□□ -0.37
SEL1L3-201ENST00000264868 LOC105371045A0A1W2PR82 267 aa12.73□□□□□ -0.37
SEL1L3-201ENST00000264868 SOGA1O94964 1423 aa12.72□□□□□ -0.37
SEL1L3-201ENST00000264868 TDRD9Q8NDG6 1382 aaKnown RBP12.71□□□□□ -0.38
SEL1L3-201ENST00000264868 MRC2Q9UBG0 1479 aa12.7□□□□□ -0.38
SEL1L3-201ENST00000264868 CSRNP3Q8WYN3 585 aa12.69□□□□□ -0.38
SEL1L3-201ENST00000264868 RAD54L2Q9Y4B4 1467 aa12.68□□□□□ -0.38
SEL1L3-201ENST00000264868 TOPBP1Q92547 1522 aa12.67□□□□□ -0.38
SEL1L3-201ENST00000264868 FGD5Q6ZNL6 1462 aa12.67□□□□□ -0.38
SEL1L3-201ENST00000264868 CUX1P39880 1505 aa12.66□□□□□ -0.38
SEL1L3-201ENST00000264868 KIF21AQ7Z4S6 1674 aa12.66□□□□□ -0.38
SEL1L3-201ENST00000264868 URB2Q14146 1524 aaKnown RBP12.66□□□□□ -0.38
SEL1L3-201ENST00000264868 CUX2O14529 1486 aa12.66□□□□□ -0.38
SEL1L3-201ENST00000264868 SYNJ1O43426 1573 aa12.64□□□□□ -0.39
SEL1L3-201ENST00000264868 TTBK1Q5TCY1 1321 aaPredicted RBP12.62□□□□□ -0.39
SEL1L3-201ENST00000264868 CHMP7Q8WUX9 453 aaPredicted RBP12.61□□□□□ -0.39
SEL1L3-201ENST00000264868 KIF27Q86VH2 1401 aa12.61□□□□□ -0.39
SEL1L3-201ENST00000264868 POLA1P09884 1462 aaPredicted RBP12.61□□□□□ -0.39
SEL1L3-201ENST00000264868 DNMBPQ6XZF7 1577 aa12.6□□□□□ -0.39
SEL1L3-201ENST00000264868 AQRO60306 1485 aaKnown RBP eCLIP12.58□□□□□ -0.47e-7■■■■□ 22
SEL1L3-201ENST00000264868 RUSC2Q8N2Y8 1516 aa12.58□□□□□ -0.4
SEL1L3-201ENST00000264868 TOP2BQ02880 1626 aa12.56□□□□□ -0.4
SEL1L3-201ENST00000264868 PRDM2Q13029 1718 aa12.52□□□□□ -0.4
SEL1L3-201ENST00000264868 ATP1B4Q9UN42 357 aaPredicted RBP12.52□□□□□ -0.4
SEL1L3-201ENST00000264868 IFT140Q96RY7 1462 aa12.51□□□□□ -0.41
SEL1L3-201ENST00000264868 CARMIL1Q5VZK9 1371 aa12.5□□□□□ -0.41
SEL1L3-201ENST00000264868 ZNF608Q9ULD9 1512 aaPredicted RBP12.5□□□□□ -0.41
SEL1L3-201ENST00000264868 GAPVD1Q14C86 1478 aa12.5□□□□□ -0.41
SEL1L3-201ENST00000264868 P3H3Q8IVL6 736 aa12.5□□□□□ -0.41
SEL1L3-201ENST00000264868 WDR62O43379 1518 aa12.48□□□□□ -0.41
SEL1L3-201ENST00000264868 EEA1Q15075 1411 aa12.47□□□□□ -0.41
SEL1L3-201ENST00000264868 IGF1RP08069 1367 aa12.47□□□□□ -0.41
SEL1L3-201ENST00000264868 BIVM-ERCC5R4GMW8 1640 aa12.45□□□□□ -0.42
SEL1L3-201ENST00000264868 THOC2Q8NI27 1593 aaKnown RBP12.44□□□□□ -0.42
SEL1L3-201ENST00000264868 ABCA10Q8WWZ4 1543 aa12.43□□□□□ -0.42
SEL1L3-201ENST00000264868 GRIN2BQ13224 1484 aa12.41□□□□□ -0.42
SEL1L3-201ENST00000264868 APLP2Q06481 763 aa12.39□□□□□ -0.43
SEL1L3-201ENST00000264868 SNAPC4Q5SXM2 1469 aa12.37□□□□□ -0.43
SEL1L3-201ENST00000264868 RAPGEF2Q9Y4G8 1499 aa12.36□□□□□ -0.43
SEL1L3-201ENST00000264868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.36□□□□□ -0.43
SEL1L3-201ENST00000264868 HNRNPUL2Q1KMD3 747 aaKnown RBP12.36□□□□□ -0.43
SEL1L3-201ENST00000264868 OSCARQ8IYS5 282 aa12.36□□□□□ -0.43
SEL1L3-201ENST00000264868 GOLGA3Q08378 1498 aa12.36□□□□□ -0.43
SEL1L3-201ENST00000264868 ARID3CA6NKF2 412 aa12.36□□□□□ -0.43
SEL1L3-201ENST00000264868 PPARGC1BQ86YN6 1023 aaKnown RBP12.36□□□□□ -0.43
SEL1L3-201ENST00000264868 FHAD1B1AJZ9 1412 aa12.33□□□□□ -0.44
SEL1L3-201ENST00000264868 TARBP1Q13395 1621 aaKnown RBP12.32□□□□□ -0.44
SEL1L3-201ENST00000264868 JPH4Q96JJ6 628 aa12.3□□□□□ -0.44
SEL1L3-201ENST00000264868 EIF4G3O43432 1585 aaKnown RBP12.3□□□□□ -0.44
SEL1L3-201ENST00000264868 TNIKQ9UKE5 1360 aa12.27□□□□□ -0.45
SEL1L3-201ENST00000264868 PRXQ9BXM0 1461 aa12.26□□□□□ -0.45
SEL1L3-201ENST00000264868 ERICH3Q5RHP9 1530 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms