Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.16■□□□□ 0.18
ACKR3P25106 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.16■□□□□ 0.18
ACKR3P25106 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.16■□□□□ 0.18
ACKR3P25106 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
ACKR3P25106 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.16■□□□□ 0.18
ACKR3P25106 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.16■□□□□ 0.18
ACKR3P25106 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ACKR3P25106 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.16■□□□□ 0.18
ACKR3P25106 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
ACKR3P25106 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.16■□□□□ 0.18
ACKR3P25106 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
ACKR3P25106 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
ACKR3P25106 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ACKR3P25106 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ACKR3P25106 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.15■□□□□ 0.18
ACKR3P25106 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.15■□□□□ 0.18
ACKR3P25106 AC135050.7-201ENST00000624508 2218 ntBASIC16.15■□□□□ 0.18
ACKR3P25106 AL357033.4-201ENST00000617703 1807 ntBASIC16.15■□□□□ 0.18
ACKR3P25106 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ACKR3P25106 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ACKR3P25106 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ACKR3P25106 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ACKR3P25106 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ACKR3P25106 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ACKR3P25106 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ACKR3P25106 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
ACKR3P25106 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.15■□□□□ 0.18
ACKR3P25106 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.15■□□□□ 0.18
ACKR3P25106 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.15■□□□□ 0.18
ACKR3P25106 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ACKR3P25106 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.15■□□□□ 0.18
ACKR3P25106 Z99916.2-201ENST00000604037 246 ntBASIC16.15■□□□□ 0.18
ACKR3P25106 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.15■□□□□ 0.18
ACKR3P25106 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ACKR3P25106 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ACKR3P25106 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ACKR3P25106 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.15■□□□□ 0.18
ACKR3P25106 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ACKR3P25106 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.15■□□□□ 0.18
ACKR3P25106 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.15■□□□□ 0.18
ACKR3P25106 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.15■□□□□ 0.18
ACKR3P25106 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ACKR3P25106 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
ACKR3P25106 BCL2-203ENST00000589955 5011 ntBASIC16.14■□□□□ 0.18
ACKR3P25106 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ACKR3P25106 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.14■□□□□ 0.18
ACKR3P25106 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ACKR3P25106 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ACKR3P25106 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ACKR3P25106 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ACKR3P25106 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ACKR3P25106 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ACKR3P25106 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ACKR3P25106 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ACKR3P25106 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ACKR3P25106 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ACKR3P25106 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.14■□□□□ 0.17
ACKR3P25106 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ACKR3P25106 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ACKR3P25106 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ACKR3P25106 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ACKR3P25106 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ACKR3P25106 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.14■□□□□ 0.17
ACKR3P25106 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.14■□□□□ 0.17
ACKR3P25106 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ACKR3P25106 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.14■□□□□ 0.17
ACKR3P25106 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.14■□□□□ 0.17
ACKR3P25106 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
ACKR3P25106 DGCR10-201ENST00000609839 495 ntBASIC16.14■□□□□ 0.17
ACKR3P25106 REXO1L10P-201ENST00000615707 1290 ntBASIC16.14■□□□□ 0.17
ACKR3P25106 AC008622.2-201ENST00000617006 1229 ntBASIC16.14■□□□□ 0.17
ACKR3P25106 REXO1L12P-201ENST00000622156 912 ntBASIC16.14■□□□□ 0.17
ACKR3P25106 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ACKR3P25106 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ACKR3P25106 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ACKR3P25106 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ACKR3P25106 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ACKR3P25106 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ACKR3P25106 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ACKR3P25106 AC073592.3-201ENST00000625118 1834 ntBASIC16.14■□□□□ 0.17
ACKR3P25106 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ACKR3P25106 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ACKR3P25106 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ACKR3P25106 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.14■□□□□ 0.17
ACKR3P25106 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ACKR3P25106 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.14■□□□□ 0.17
ACKR3P25106 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ACKR3P25106 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
ACKR3P25106 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ACKR3P25106 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.13■□□□□ 0.17
ACKR3P25106 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ACKR3P25106 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.13■□□□□ 0.17
ACKR3P25106 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ACKR3P25106 BICD1-207ENST00000551848 1962 ntBASIC16.13■□□□□ 0.17
ACKR3P25106 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.13■□□□□ 0.17
ACKR3P25106 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ACKR3P25106 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ACKR3P25106 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.13■□□□□ 0.17
ACKR3P25106 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ACKR3P25106 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms