Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNCRIPO60506 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SYNCRIPO60506 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNCRIPO60506 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNCRIPO60506 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNCRIPO60506 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNCRIPO60506 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.98■□□□□ 0.63
SYNCRIPO60506 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.98■□□□□ 0.63
SYNCRIPO60506 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.98■□□□□ 0.63
SYNCRIPO60506 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
SYNCRIPO60506 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.98■□□□□ 0.63
SYNCRIPO60506 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SYNCRIPO60506 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.98■□□□□ 0.63
SYNCRIPO60506 KRT18P48-201ENST00000434763 852 ntBASIC18.98■□□□□ 0.63
SYNCRIPO60506 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.98■□□□□ 0.63
SYNCRIPO60506 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.98■□□□□ 0.63
SYNCRIPO60506 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.98■□□□□ 0.63
SYNCRIPO60506 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.98■□□□□ 0.63
SYNCRIPO60506 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.98■□□□□ 0.63
SYNCRIPO60506 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.98■□□□□ 0.63
SYNCRIPO60506 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.98■□□□□ 0.63
SYNCRIPO60506 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.98■□□□□ 0.63
SYNCRIPO60506 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNCRIPO60506 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNCRIPO60506 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNCRIPO60506 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNCRIPO60506 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNCRIPO60506 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SYNCRIPO60506 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNCRIPO60506 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.97■□□□□ 0.63
SYNCRIPO60506 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNCRIPO60506 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNCRIPO60506 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYNCRIPO60506 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.97■□□□□ 0.63
SYNCRIPO60506 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNCRIPO60506 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SYNCRIPO60506 HCG11-201ENST00000411553 5696 ntBASIC18.97■□□□□ 0.63
SYNCRIPO60506 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SYNCRIPO60506 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SYNCRIPO60506 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.97■□□□□ 0.63
SYNCRIPO60506 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNCRIPO60506 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.97■□□□□ 0.63
SYNCRIPO60506 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.97■□□□□ 0.63
SYNCRIPO60506 AL645929.1-201ENST00000420084 975 ntBASIC18.97■□□□□ 0.63
SYNCRIPO60506 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.97■□□□□ 0.63
SYNCRIPO60506 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYNCRIPO60506 AC092597.1-201ENST00000487352 616 ntBASIC18.97■□□□□ 0.63
SYNCRIPO60506 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNCRIPO60506 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.97■□□□□ 0.63
SYNCRIPO60506 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.97■□□□□ 0.63
SYNCRIPO60506 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNCRIPO60506 AL032819.2-201ENST00000624543 2162 ntBASIC18.97■□□□□ 0.63
SYNCRIPO60506 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.97■□□□□ 0.63
SYNCRIPO60506 TEX21P-204ENST00000641479 1693 ntBASIC18.97■□□□□ 0.63
SYNCRIPO60506 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SYNCRIPO60506 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYNCRIPO60506 AC004408.2-201ENST00000623613 2777 ntBASIC18.97■□□□□ 0.63
SYNCRIPO60506 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYNCRIPO60506 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.97■□□□□ 0.63
SYNCRIPO60506 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.97■□□□□ 0.63
SYNCRIPO60506 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNCRIPO60506 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNCRIPO60506 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.96■□□□□ 0.63
SYNCRIPO60506 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 RCC2P3-201ENST00000418112 1537 ntBASIC18.96■□□□□ 0.63
SYNCRIPO60506 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.96■□□□□ 0.63
SYNCRIPO60506 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SYNCRIPO60506 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SYNCRIPO60506 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.96■□□□□ 0.63
SYNCRIPO60506 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.96■□□□□ 0.63
SYNCRIPO60506 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.96■□□□□ 0.63
SYNCRIPO60506 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SYNCRIPO60506 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.96■□□□□ 0.63
SYNCRIPO60506 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.96■□□□□ 0.63
SYNCRIPO60506 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNCRIPO60506 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SYNCRIPO60506 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SYNCRIPO60506 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNCRIPO60506 AL109659.2-201ENST00000606809 1674 ntBASIC18.95■□□□□ 0.62
SYNCRIPO60506 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms