Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BCAS3Q9H6U6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BCAS3Q9H6U6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BCAS3Q9H6U6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.91■□□□□ 0.94
BCAS3Q9H6U6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BCAS3Q9H6U6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.91■□□□□ 0.94
BCAS3Q9H6U6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BCAS3Q9H6U6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
BCAS3Q9H6U6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.91■□□□□ 0.94
BCAS3Q9H6U6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.91■□□□□ 0.94
BCAS3Q9H6U6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.91■□□□□ 0.94
BCAS3Q9H6U6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.91■□□□□ 0.94
BCAS3Q9H6U6 HEIH-201ENST00000623091 1652 ntBASIC20.91■□□□□ 0.94
BCAS3Q9H6U6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.91■□□□□ 0.94
BCAS3Q9H6U6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.91■□□□□ 0.94
BCAS3Q9H6U6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 AC018445.3-201ENST00000624177 1945 ntBASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 AC034236.2-201ENST00000606662 1610 ntBASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 MIR662-201ENST00000384847 95 ntBASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 AP002383.4-201ENST00000442518 975 ntBASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 CLEC4GP1-201ENST00000596555 870 ntBASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 Z98044.1-201ENST00000632503 1764 ntBASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
BCAS3Q9H6U6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
BCAS3Q9H6U6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.89■□□□□ 0.94
BCAS3Q9H6U6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
BCAS3Q9H6U6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BCAS3Q9H6U6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
BCAS3Q9H6U6 ATP5G2P1-201ENST00000433580 426 ntBASIC20.89■□□□□ 0.93
BCAS3Q9H6U6 KRT18P48-201ENST00000434763 852 ntBASIC20.89■□□□□ 0.93
BCAS3Q9H6U6 MIR3180-1-201ENST00000580374 94 ntBASIC20.89■□□□□ 0.93
BCAS3Q9H6U6 MIR3180-3-201ENST00000584616 94 ntBASIC20.89■□□□□ 0.93
BCAS3Q9H6U6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
BCAS3Q9H6U6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BCAS3Q9H6U6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
BCAS3Q9H6U6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
BCAS3Q9H6U6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BCAS3Q9H6U6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.89■□□□□ 0.93
BCAS3Q9H6U6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BCAS3Q9H6U6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BCAS3Q9H6U6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.89■□□□□ 0.93
BCAS3Q9H6U6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BCAS3Q9H6U6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BCAS3Q9H6U6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BCAS3Q9H6U6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BCAS3Q9H6U6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BCAS3Q9H6U6 AC004408.2-201ENST00000623613 2777 ntBASIC20.88■□□□□ 0.93
BCAS3Q9H6U6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BCAS3Q9H6U6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.88■□□□□ 0.93
BCAS3Q9H6U6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.88■□□□□ 0.93
BCAS3Q9H6U6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BCAS3Q9H6U6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BCAS3Q9H6U6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
BCAS3Q9H6U6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BCAS3Q9H6U6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BCAS3Q9H6U6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
BCAS3Q9H6U6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BCAS3Q9H6U6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BCAS3Q9H6U6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BCAS3Q9H6U6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
BCAS3Q9H6U6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BCAS3Q9H6U6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
BCAS3Q9H6U6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.87■□□□□ 0.93
BCAS3Q9H6U6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
BCAS3Q9H6U6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BCAS3Q9H6U6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BCAS3Q9H6U6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
BCAS3Q9H6U6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.87■□□□□ 0.93
BCAS3Q9H6U6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms