Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PSD4Q8NDX1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PSD4Q8NDX1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PSD4Q8NDX1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.55■□□□□ 0.4
PSD4Q8NDX1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PSD4Q8NDX1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.55■□□□□ 0.4
PSD4Q8NDX1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PSD4Q8NDX1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.55■□□□□ 0.4
PSD4Q8NDX1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.55■□□□□ 0.4
PSD4Q8NDX1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.55■□□□□ 0.4
PSD4Q8NDX1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
PSD4Q8NDX1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.55■□□□□ 0.4
PSD4Q8NDX1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.55■□□□□ 0.4
PSD4Q8NDX1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.55■□□□□ 0.4
PSD4Q8NDX1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.55■□□□□ 0.4
PSD4Q8NDX1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
PSD4Q8NDX1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PSD4Q8NDX1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
PSD4Q8NDX1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PSD4Q8NDX1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PSD4Q8NDX1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.55■□□□□ 0.4
PSD4Q8NDX1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PSD4Q8NDX1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.55■□□□□ 0.4
PSD4Q8NDX1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 KRT18P57-201ENST00000443599 1254 ntBASIC17.54■□□□□ 0.4
PSD4Q8NDX1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 PRSS44-201ENST00000515154 1146 ntBASIC17.54■□□□□ 0.4
PSD4Q8NDX1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 AC010331.1-201ENST00000611423 582 ntBASIC17.54■□□□□ 0.4
PSD4Q8NDX1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 KRT8P11-201ENST00000409686 1436 ntBASIC17.54■□□□□ 0.4
PSD4Q8NDX1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.54■□□□□ 0.4
PSD4Q8NDX1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PSD4Q8NDX1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PSD4Q8NDX1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
PSD4Q8NDX1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PSD4Q8NDX1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PSD4Q8NDX1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PSD4Q8NDX1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PSD4Q8NDX1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.53■□□□□ 0.4
PSD4Q8NDX1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PSD4Q8NDX1 INGX-201ENST00000359239 846 ntBASIC17.53■□□□□ 0.4
PSD4Q8NDX1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PSD4Q8NDX1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PSD4Q8NDX1 LIN28AP1-201ENST00000429574 405 ntBASIC17.53■□□□□ 0.4
PSD4Q8NDX1 CA15P1-201ENST00000481698 905 ntBASIC17.53■□□□□ 0.4
PSD4Q8NDX1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PSD4Q8NDX1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PSD4Q8NDX1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PSD4Q8NDX1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.53■□□□□ 0.4
PSD4Q8NDX1 FAM87A-204ENST00000613235 858 ntBASIC17.53■□□□□ 0.4
PSD4Q8NDX1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PSD4Q8NDX1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PSD4Q8NDX1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PSD4Q8NDX1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PSD4Q8NDX1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PSD4Q8NDX1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PSD4Q8NDX1 CROCCP3-202ENST00000420820 1947 ntBASIC17.53■□□□□ 0.4
PSD4Q8NDX1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PSD4Q8NDX1 AP000997.3-201ENST00000623333 2250 ntBASIC17.52■□□□□ 0.4
PSD4Q8NDX1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PSD4Q8NDX1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PSD4Q8NDX1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PSD4Q8NDX1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PSD4Q8NDX1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.52■□□□□ 0.4
PSD4Q8NDX1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PSD4Q8NDX1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PSD4Q8NDX1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PSD4Q8NDX1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PSD4Q8NDX1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.52■□□□□ 0.4
PSD4Q8NDX1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.52■□□□□ 0.4
PSD4Q8NDX1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PSD4Q8NDX1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PSD4Q8NDX1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.52■□□□□ 0.4
PSD4Q8NDX1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms