Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SNRPEP62304 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SNRPEP62304 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 AC005703.6-201ENST00000623265 1329 ntBASIC14.32□□□□□ -0.12
SNRPEP62304 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SNRPEP62304 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.32□□□□□ -0.12
SNRPEP62304 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.32□□□□□ -0.12
SNRPEP62304 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.32□□□□□ -0.12
SNRPEP62304 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SNRPEP62304 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.32□□□□□ -0.12
SNRPEP62304 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.31□□□□□ -0.12
SNRPEP62304 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.31□□□□□ -0.12
SNRPEP62304 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.31□□□□□ -0.12
SNRPEP62304 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
SNRPEP62304 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.31□□□□□ -0.12
SNRPEP62304 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
SNRPEP62304 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
SNRPEP62304 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.31□□□□□ -0.12
SNRPEP62304 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 IDNK-203ENST00000405990 629 ntTSL 2 BASIC14.31□□□□□ -0.12
SNRPEP62304 AL162393.1-201ENST00000437852 946 ntBASIC14.31□□□□□ -0.12
SNRPEP62304 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC14.31□□□□□ -0.12
SNRPEP62304 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.31□□□□□ -0.12
SNRPEP62304 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SNRPEP62304 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.31□□□□□ -0.12
SNRPEP62304 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.31□□□□□ -0.12
SNRPEP62304 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SNRPEP62304 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
SNRPEP62304 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SNRPEP62304 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SNRPEP62304 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SNRPEP62304 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNRPEP62304 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SNRPEP62304 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SNRPEP62304 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.3□□□□□ -0.12
SNRPEP62304 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNRPEP62304 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SNRPEP62304 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.3□□□□□ -0.12
SNRPEP62304 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SNRPEP62304 AC099063.4-201ENST00000641099 1602 ntBASIC14.3□□□□□ -0.12
SNRPEP62304 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SNRPEP62304 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.3□□□□□ -0.12
SNRPEP62304 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNRPEP62304 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNRPEP62304 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SNRPEP62304 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNRPEP62304 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNRPEP62304 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
SNRPEP62304 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNRPEP62304 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.3□□□□□ -0.12
SNRPEP62304 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SNRPEP62304 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNRPEP62304 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
SNRPEP62304 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNRPEP62304 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SNRPEP62304 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNRPEP62304 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNRPEP62304 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC14.3□□□□□ -0.12
SNRPEP62304 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SNRPEP62304 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SNRPEP62304 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SNRPEP62304 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNRPEP62304 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
SNRPEP62304 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.3□□□□□ -0.12
SNRPEP62304 STX4-202ENST00000394998 1498 ntTSL 2 BASIC14.3□□□□□ -0.12
SNRPEP62304 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNRPEP62304 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms