Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 AC068587.9-201ENST00000641814 219 ntBASIC18.2■□□□□ 0.5
RNF11Q9Y3C5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RNF11Q9Y3C5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF11Q9Y3C5 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF11Q9Y3C5 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RNF11Q9Y3C5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF11Q9Y3C5 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF11Q9Y3C5 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF11Q9Y3C5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 GCSHP5-201ENST00000443090 522 ntBASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 AC126763.1-201ENST00000552015 2118 ntBASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
RNF11Q9Y3C5 AC067852.2-201ENST00000590513 2313 ntBASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 AL135905.2-201ENST00000584934 1404 ntBASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 AL499627.1-201ENST00000569373 2188 ntBASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF11Q9Y3C5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 FSCN1P1-201ENST00000568912 1481 ntBASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms