Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LIN28AQ9H9Z2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LIN28AQ9H9Z2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LIN28AQ9H9Z2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 AC009053.2-201ENST00000563701 2365 ntBASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 BX088651.1-201ENST00000540551 451 ntBASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.93■□□□□ 0.46
LIN28AQ9H9Z2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 MESTP1-201ENST00000404287 994 ntBASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 RBM17P1-201ENST00000453646 1190 ntBASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 AP000525.1-201ENST00000608286 694 ntBASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.92■□□□□ 0.46
LIN28AQ9H9Z2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LIN28AQ9H9Z2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.91■□□□□ 0.46
LIN28AQ9H9Z2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.91■□□□□ 0.46
LIN28AQ9H9Z2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LIN28AQ9H9Z2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LIN28AQ9H9Z2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LIN28AQ9H9Z2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LIN28AQ9H9Z2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LIN28AQ9H9Z2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.91■□□□□ 0.46
LIN28AQ9H9Z2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LIN28AQ9H9Z2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LIN28AQ9H9Z2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.91■□□□□ 0.46
LIN28AQ9H9Z2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LIN28AQ9H9Z2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LIN28AQ9H9Z2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LIN28AQ9H9Z2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LIN28AQ9H9Z2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LIN28AQ9H9Z2 AL390955.1-201ENST00000428694 934 ntBASIC17.91■□□□□ 0.46
LIN28AQ9H9Z2 AC008040.2-201ENST00000461049 708 ntBASIC17.91■□□□□ 0.46
LIN28AQ9H9Z2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LIN28AQ9H9Z2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms