Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.2■□□□□ 0.66
HDAC11Q96DB2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HDAC11Q96DB2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.2■□□□□ 0.66
HDAC11Q96DB2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.2■□□□□ 0.66
HDAC11Q96DB2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.2■□□□□ 0.66
HDAC11Q96DB2 WIZP1-201ENST00000531444 2299 ntBASIC19.2■□□□□ 0.66
HDAC11Q96DB2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 AL357033.4-201ENST00000617703 1807 ntBASIC19.19■□□□□ 0.66
HDAC11Q96DB2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 AL023284.2-201ENST00000405850 579 ntBASIC19.19■□□□□ 0.66
HDAC11Q96DB2 MIR1238-201ENST00000408483 83 ntBASIC19.19■□□□□ 0.66
HDAC11Q96DB2 AL023803.3-201ENST00000615559 522 ntBASIC19.19■□□□□ 0.66
HDAC11Q96DB2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 GPAT2P1-201ENST00000444924 1672 ntBASIC19.19■□□□□ 0.66
HDAC11Q96DB2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC11Q96DB2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC11Q96DB2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 AC008556.1-201ENST00000610908 2040 ntBASIC19.17■□□□□ 0.66
HDAC11Q96DB2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 AL596275.1-201ENST00000423464 877 ntBASIC19.17■□□□□ 0.66
HDAC11Q96DB2 MCCD1P1-208ENST00000445732 328 ntBASIC19.17■□□□□ 0.66
HDAC11Q96DB2 TSPY15P-201ENST00000457163 923 ntBASIC19.17■□□□□ 0.66
HDAC11Q96DB2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC11Q96DB2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms