Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CDH15P55291 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH15P55291 AC108860.2-201ENST00000562760 2183 ntBASIC17.39■□□□□ 0.37
CDH15P55291 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH15P55291 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH15P55291 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH15P55291 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH15P55291 BX276092.2-201ENST00000417668 665 ntBASIC17.39■□□□□ 0.37
CDH15P55291 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH15P55291 POU5F1P3-201ENST00000428824 1078 ntBASIC17.39■□□□□ 0.37
CDH15P55291 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.39■□□□□ 0.37
CDH15P55291 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH15P55291 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH15P55291 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDH15P55291 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH15P55291 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH15P55291 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CDH15P55291 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH15P55291 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH15P55291 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH15P55291 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH15P55291 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH15P55291 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH15P55291 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH15P55291 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH15P55291 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH15P55291 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH15P55291 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH15P55291 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH15P55291 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH15P55291 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH15P55291 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH15P55291 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH15P55291 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH15P55291 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH15P55291 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH15P55291 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH15P55291 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH15P55291 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH15P55291 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH15P55291 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH15P55291 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH15P55291 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH15P55291 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH15P55291 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH15P55291 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH15P55291 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH15P55291 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH15P55291 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CDH15P55291 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH15P55291 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH15P55291 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CDH15P55291 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CDH15P55291 AC018553.1-201ENST00000616682 1458 ntBASIC17.37■□□□□ 0.37
CDH15P55291 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH15P55291 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH15P55291 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH15P55291 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH15P55291 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH15P55291 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH15P55291 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH15P55291 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH15P55291 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH15P55291 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH15P55291 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH15P55291 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH15P55291 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CDH15P55291 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH15P55291 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.37■□□□□ 0.37
CDH15P55291 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.37■□□□□ 0.37
CDH15P55291 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH15P55291 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH15P55291 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH15P55291 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH15P55291 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CDH15P55291 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH15P55291 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH15P55291 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH15P55291 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.37■□□□□ 0.37
CDH15P55291 AD000864.1-201ENST00000624076 2295 ntBASIC17.37■□□□□ 0.37
CDH15P55291 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH15P55291 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDH15P55291 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CDH15P55291 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH15P55291 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH15P55291 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH15P55291 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH15P55291 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CDH15P55291 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH15P55291 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH15P55291 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH15P55291 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH15P55291 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH15P55291 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH15P55291 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH15P55291 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH15P55291 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH15P55291 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH15P55291 AC018695.7-201ENST00000624587 2492 ntBASIC17.36■□□□□ 0.37
CDH15P55291 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms