Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 AC080038.3-201ENST00000623346 1952 ntBASIC7.64□□□□□ -1.19
MACF1Q9UPN3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 TPI1-206ENST00000488464 791 ntTSL 5 BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 MTDHP4-201ENST00000600287 670 ntBASIC7.64□□□□□ -1.19
MACF1Q9UPN3 AC026740.1-201ENST00000607068 791 ntBASIC7.64□□□□□ -1.19
MACF1Q9UPN3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 AC004817.3-201ENST00000602957 2129 ntBASIC7.64□□□□□ -1.19
MACF1Q9UPN3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 AC079776.1-201ENST00000401540 1152 ntBASIC7.64□□□□□ -1.19
MACF1Q9UPN3 CASP16P-204ENST00000635032 809 ntBASIC7.64□□□□□ -1.19
MACF1Q9UPN3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
MACF1Q9UPN3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 AC097374.2-201ENST00000618617 1306 ntBASIC7.63□□□□□ -1.19
MACF1Q9UPN3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 INTS4P1-201ENST00000438455 1935 ntBASIC7.63□□□□□ -1.19
MACF1Q9UPN3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 AC004835.2-201ENST00000603762 682 ntBASIC7.63□□□□□ -1.19
MACF1Q9UPN3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 H19-201ENST00000411754 1788 ntTSL 5 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
MACF1Q9UPN3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms