Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 AC068880.1-201ENST00000507289 2297 ntBASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 UNC93B4-201ENST00000505679 747 ntBASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 PRKY-204ENST00000533551 1019 ntBASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 AC008687.6-201ENST00000596318 630 ntBASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.26■□□□□ 0.19
FOXRED1Q96CU9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 ABHD17AP1-201ENST00000358206 933 ntBASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 TSPY20P-201ENST00000450910 630 ntBASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 MIR4651-201ENST00000582622 73 ntBASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.25■□□□□ 0.19
FOXRED1Q96CU9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
FOXRED1Q96CU9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms